RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 MS4A2Q01362 244 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 CD47Q08722 323 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 BTN1A1Q13410 526 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 C16orf72Q14CZ0 275 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 TPD52L1Q16890 204 aaPredicted RBP1.28□□□□□ -2.2
HIF1A-212ENST00000557538 LRRC26Q2I0M4 334 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 CDNFQ49AH0 187 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 PTPN20Q4JDL3 420 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 GCSAMLQ5JQS6 135 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 PPM1LQ5SGD2 360 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 FAHD1Q6P587 224 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 DRAM2Q6UX65 266 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 H2BFWTQ7Z2G1 175 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 SLC30A8Q8IWU4 369 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 RELL2Q8NC24 303 aaPredicted RBP1.28□□□□□ -2.2
HIF1A-212ENST00000557538 OR10G3Q8NGC4 313 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 OR4D5Q8NGN0 318 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 FAM3CQ92520 227 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 LHX4Q969G2 390 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 SMIM12Q96EX1 92 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 CXorf58Q96LI9 332 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 C12orf42Q96LP6 360 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 PFDN5Q99471 154 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 TSNAXQ99598 290 aaKnown RBP1.28□□□□□ -2.2
HIF1A-212ENST00000557538 MED10Q9BTT4 135 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 CHST5Q9GZS9 411 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 ACTR8Q9H981 624 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 PLEKHA1Q9HB21 404 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 SGK2Q9HBY8 427 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 ABCB9Q9NP78 766 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 DCAF13Q9NV06 445 aaKnown RBP1.28□□□□□ -2.2
HIF1A-212ENST00000557538 GSKIPQ9P0R6 139 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 CLN8Q9UBY8 286 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF282Q9UDV7 671 aaPredicted RBP1.28□□□□□ -2.2
HIF1A-212ENST00000557538 RSL24D1Q9UHA3 163 aaKnown RBP1.28□□□□□ -2.2
HIF1A-212ENST00000557538 SCP2D1Q9UJQ7 156 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 PIGLQ9Y2B2 252 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 ZFP30Q9Y2G7 519 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 PPIAL4AQ9Y536 164 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 KDM6BO15054 1643 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 ANKARQ7Z5J8 1434 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 TCHHQ07283 1943 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 ITSN1Q15811 1721 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 NFAT5O94916 1531 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 CUX1P39880 1505 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 URB2Q14146 1524 aaKnown RBP1.28□□□□□ -2.2
HIF1A-212ENST00000557538 RALGAPBQ86X10 1494 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 COL22A1Q8NFW1 1626 aaPredicted RBP1.28□□□□□ -2.2
HIF1A-212ENST00000557538 A0A087WWV3 80 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 A0A096LPI6 279 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 A0A1B0GV72 72 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 CIB4A0PJX0 185 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 CCDC160A6NGH7 325 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 ANKRD30BLA7E2S9 258 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 C21orf140B9A014 251 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF878C9JN71 531 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 NPIPA7E9PJI5 369 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 TEX46H3BTG2 121 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 UPK1AO00322 258 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 TGOLN2O43493 480 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 OR1F1O43749 312 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 TIMM8AO60220 97 aaPredicted RBP1.28□□□□□ -2.2
HIF1A-212ENST00000557538 ENTPD5O75356 428 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 VENTXO95231 258 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 SERPINA1P01009 418 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 FTH1P02794 183 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 WNT2P09544 360 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 GIG44P09565 113 aaPredicted RBP1.28□□□□□ -2.2
HIF1A-212ENST00000557538 NPIPA8P0DM63 369 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF25P17030 456 aaPredicted RBP1.28□□□□□ -2.2
HIF1A-212ENST00000557538 BCKDHBP21953 392 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 HTR1EP28566 365 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 RPL4P36578 427 aaKnown RBP1.28□□□□□ -2.2
HIF1A-212ENST00000557538 KIR2DS4P43632 304 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 COPZ1P61923 177 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 NTHL1P78549 312 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 CDK5Q00535 292 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 OC90Q02509 493 aaPredicted RBP1.28□□□□□ -2.2
HIF1A-212ENST00000557538 PAX2Q02962 417 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 ACVR1Q04771 509 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 PRPSAP1Q14558 356 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 OR4D1Q15615 310 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF77Q15935 545 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 DGUOKQ16854 277 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 LIPKQ5VXJ0 399 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 LEMD1Q68G75 181 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 OR2A2Q6IF42 318 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 OR52W1Q6IF63 320 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF544Q6NX49 715 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 TEX261Q6UWH6 196 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 ALKAL1Q6UXT8 129 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 LGI3Q8N145 548 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 GABRG1Q8N1C3 465 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 PIGXQ8TBF5 258 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 BLOC1S5Q8TDH9 187 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 ISOC2Q96AB3 205 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 TLCD1Q96CP7 247 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 TXNIPQ9H3M7 391 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 ELL3Q9HB65 397 aaPredicted RBP1.28□□□□□ -2.2
HIF1A-212ENST00000557538 MIEF1Q9NQG6 463 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms