RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 ADAM10O14672 748 aa9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 BCAT2O15382 392 aaPredicted RBP9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 TGOLN2O43493 480 aa9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 SYT7O43581 403 aa9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 NDUFS6O75380 124 aaKnown RBP9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 H2BFMP0C1H6 154 aa9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 HIST1H1BP16401 226 aaKnown RBP9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 AMY2BP19961 511 aa9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 GNALP38405 381 aa9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 OR3A2P47893 321 aa9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 KIAA0141Q14154 515 aaPredicted RBP9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 RPUSD3Q6P087 351 aaKnown RBP9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 KLHL24Q6TFL4 600 aa9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 LANCL3Q6ZV70 420 aa9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 COX15Q7KZN9 410 aa9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 SLC25A45Q8N413 288 aa9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 SPEM1Q8N4L4 309 aa9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 OR13G1Q8NGZ3 307 aa9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 STT3BQ8TCJ2 826 aa9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 SLC25A43Q8WUT9 341 aaPredicted RBP9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 EIF5A2Q9GZV4 153 aaKnown RBP9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 C19orf12Q9NSK7 152 aa9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 FAM206AQ9NX38 181 aa9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 PISDQ9UG56 409 aa9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 COA3Q9Y2R0 106 aaPredicted RBP9.42□□□□□ -0.9
MTHFD1-210ENST00000555252 BTBD17A6NE02 478 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 ARGFXA6NJG6 315 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 MS4A18H0YCH9 400 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 RPL36A-HNRNPH2H7BZ11 118 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 CDC14BO60729 498 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 ZNF354AO60765 605 aaPredicted RBP9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 OR2C1O95371 312 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 TTRP02766 147 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 HEXBP07686 556 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 PNLIPP16233 465 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 AKR1C3P42330 323 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 CAMLGP49069 296 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 RBP2P50120 134 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 SPEM2Q0P670 501 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 SQSTM1Q13501 440 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 IAH1Q2TAA2 248 aaPredicted RBP9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 MS4A18Q3C1V0 323 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 PYY3Q5JQD4 70 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 ANKRD37Q7Z713 158 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 ZNF101Q8IZC7 436 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 NFAM1Q8NET5 270 aaPredicted RBP9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 OR5L2Q8NGL0 311 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 FBXO17Q96EF6 278 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 GALNT14Q96FL9 552 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 RSRP1Q9BUV0 290 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 TMEM59Q9BXS4 323 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 OR11A1Q9GZK7 315 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 CHST11Q9NPF2 352 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 SIRT7Q9NRC8 400 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 SDHAF3Q9NRP4 125 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 GSKIPQ9P0R6 139 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 ADAMTS9Q9P2N4 1935 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 C17orf51A8MQB3 221 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 ETV2O00321 342 aaPredicted RBP9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 RRP8O43159 456 aaKnown RBP9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 GPR137BO60478 399 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 OR2B8PP59922 312 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 RPS23P62266 143 aaKnown RBP9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 PLAC9Q5JTB6 97 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 OR2A2Q6IF42 318 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 FAM89BQ8N5H3 189 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 RNASE11Q8TAA1 199 aaKnown RBP9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 RNF138Q8WVD3 245 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 MUCL1Q96DR8 90 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 C1orf147Q96MC9 270 aaPredicted RBP9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 KCNK17Q96T54 332 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 DUSP15Q9H1R2 295 aaPredicted RBP9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 UBE2ZQ9H832 354 aaPredicted RBP9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 DECR2Q9NUI1 292 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 ALKBH4Q9NXW9 302 aa9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 MRPS28Q9Y2Q9 187 aaKnown RBP9.41□□□□□ -0.9
MTHFD1-210ENST00000555252 A0A0A6YYD4 124 aa9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 VSTM2BA6NLU5 285 aa9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 SERPINE3A8MV23 424 aa9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 LMX1BO60663 402 aa9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 CTSDP07339 412 aaPredicted RBP9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 SFTPBP07988 381 aa9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 GIMD1P0DJR0 217 aa9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 ZNF20P17024 532 aa9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 RAB4BP61018 213 aa9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 FOXK1P85037 733 aa9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 SLC25A53Q5H9E4 307 aa9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 NCMAPQ5T1S8 102 aa9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 HIST2H3PS2Q5TEC6 136 aa9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 PTCRAQ6ISU1 281 aaPredicted RBP9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 GLIPR1L1Q6UWM5 242 aa9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 REC114Q7Z4M0 266 aa9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 FAM219AQ8IW50 185 aa9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 SGPP2Q8IWX5 399 aa9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 APCDD1LQ8NCL9 501 aa9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 ADPRHL1Q8NDY3 354 aa9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 DNAJA3Q96EY1 480 aa9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 ADAT3Q96EY9 351 aaPredicted RBP9.4□□□□□ -0.9
MTHFD1-210ENST00000555252 FOXN4Q96NZ1 517 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms