RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 RBP2P50120 134 aa12.21□□□□□ -0.46
TNFRSF1A-216ENST00000543995 ATP1B3P54709 279 aa12.21□□□□□ -0.46
TNFRSF1A-216ENST00000543995 MTCP1P56278 107 aa12.21□□□□□ -0.46
TNFRSF1A-216ENST00000543995 RIN1Q13671 783 aa12.21□□□□□ -0.46
TNFRSF1A-216ENST00000543995 ZNF181Q2M3W8 571 aa12.21□□□□□ -0.46
TNFRSF1A-216ENST00000543995 FAM76BQ5HYJ3 339 aa12.21□□□□□ -0.46
TNFRSF1A-216ENST00000543995 HAGHLQ6PII5 290 aaPredicted RBP12.21□□□□□ -0.46
TNFRSF1A-216ENST00000543995 DNM1P46Q6ZS02 220 aa12.21□□□□□ -0.46
TNFRSF1A-216ENST00000543995 LHFPL2Q6ZUX7 228 aa12.21□□□□□ -0.46
TNFRSF1A-216ENST00000543995 BOLLQ8N9W6 283 aaKnown RBP12.21□□□□□ -0.46
TNFRSF1A-216ENST00000543995 DNAAF1Q8NEP3 725 aa12.21□□□□□ -0.46
TNFRSF1A-216ENST00000543995 Q8TCH9 128 aa12.21□□□□□ -0.46
TNFRSF1A-216ENST00000543995 BPESC1Q9GZL8 116 aa12.21□□□□□ -0.46
TNFRSF1A-216ENST00000543995 OR51I2Q9H344 312 aa12.21□□□□□ -0.46
TNFRSF1A-216ENST00000543995 NOX4Q9NPH5 578 aa12.21□□□□□ -0.46
TNFRSF1A-216ENST00000543995 RNF7Q9UBF6 113 aa12.21□□□□□ -0.46
TNFRSF1A-216ENST00000543995 SF3B6Q9Y3B4 125 aaKnown RBP12.21□□□□□ -0.46
TNFRSF1A-216ENST00000543995 CSMD1Q96PZ7 3565 aa12.2□□□□□ -0.46
TNFRSF1A-216ENST00000543995 TRBV5-7A0A0A0MS05 114 aa12.2□□□□□ -0.46
TNFRSF1A-216ENST00000543995 TMEM178BH3BS89 294 aa12.2□□□□□ -0.46
TNFRSF1A-216ENST00000543995 GABRPO00591 440 aa12.2□□□□□ -0.46
TNFRSF1A-216ENST00000543995 PLATP00750 562 aa12.2□□□□□ -0.46
TNFRSF1A-216ENST00000543995 GP2P55259 537 aaKnown RBP12.2□□□□□ -0.46
TNFRSF1A-216ENST00000543995 FABP5Q01469 135 aa12.2□□□□□ -0.46
TNFRSF1A-216ENST00000543995 AVPI1Q5T686 147 aa12.2□□□□□ -0.46
TNFRSF1A-216ENST00000543995 ASPHD2Q6ICH7 369 aa12.2□□□□□ -0.46
TNFRSF1A-216ENST00000543995 WDR82Q6UXN9 313 aa12.2□□□□□ -0.46
TNFRSF1A-216ENST00000543995 UNQ9370/PRO34162Q6UXP9 181 aa12.2□□□□□ -0.46
TNFRSF1A-216ENST00000543995 SATL1Q86VE3 508 aa12.2□□□□□ -0.46
TNFRSF1A-216ENST00000543995 C11orf53Q8IXP5 236 aa12.2□□□□□ -0.46
TNFRSF1A-216ENST00000543995 OR51A2Q8NGJ7 313 aa12.2□□□□□ -0.46
TNFRSF1A-216ENST00000543995 LRRC29Q8WV35 223 aa12.2□□□□□ -0.46
TNFRSF1A-216ENST00000543995 RAB1CQ92928 201 aa12.2□□□□□ -0.46
TNFRSF1A-216ENST00000543995 SPACA5Q96QH8 159 aa12.2□□□□□ -0.46
TNFRSF1A-216ENST00000543995 TLNRD1Q9H1K6 362 aa12.2□□□□□ -0.46
TNFRSF1A-216ENST00000543995 TCF7L1Q9HCS4 588 aa12.2□□□□□ -0.46
TNFRSF1A-216ENST00000543995 FOXJ3Q9UPW0 622 aa12.2□□□□□ -0.46
TNFRSF1A-216ENST00000543995 NPTNQ9Y639 398 aa12.2□□□□□ -0.46
TNFRSF1A-216ENST00000543995 IGKV1-27A0A075B6S5 117 aa12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 TRAV8-7A0A075B6U6 113 aa12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 ISPDA4D126 451 aa12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 TRIM64CA6NLI5 447 aa12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 PIN1P1O15428 100 aa12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 SC5DO75845 299 aa12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 ALX3O95076 343 aa12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 ZNF205O95201 554 aa12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 SMIM18P0DKX4 95 aa12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 SLC25A16P16260 332 aa12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 FSTP19883 344 aa12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 BDKRB2P30411 391 aa12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 NR4A2P43354 598 aa12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 GMFBP60983 142 aa12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 HSD17B12Q53GQ0 312 aa12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 FAM27D1Q5T7N8 215 aa12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 ANGPTL5Q86XS5 388 aa12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 CALHM1Q8IU99 346 aa12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 ZNF671Q8TAW3 534 aa12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 RFT1Q96AA3 541 aa12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 CPNE2Q96FN4 548 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 GPER1Q99527 375 aa12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 MRPS26Q9BYN8 205 aaKnown RBP12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 METTL17Q9H7H0 456 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 TMEM138Q9NPI0 162 aa12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 POLDIP2Q9Y2S7 368 aa12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 WIPI2Q9Y4P8 454 aa12.19□□□□□ -0.46
TNFRSF1A-216ENST00000543995 TRIM64BA6NI03 449 aa12.18□□□□□ -0.46
TNFRSF1A-216ENST00000543995 J3QT63 122 aa12.18□□□□□ -0.46
TNFRSF1A-216ENST00000543995 RHBDL1O75783 438 aa12.18□□□□□ -0.46
TNFRSF1A-216ENST00000543995 MAS1P04201 325 aa12.18□□□□□ -0.46
TNFRSF1A-216ENST00000543995 CD36P16671 472 aa12.18□□□□□ -0.46
TNFRSF1A-216ENST00000543995 IGFBP3P17936 291 aaPredicted RBP12.18□□□□□ -0.46
TNFRSF1A-216ENST00000543995 POU3F4P49335 361 aa12.18□□□□□ -0.46
TNFRSF1A-216ENST00000543995 KISS1Q15726 138 aa12.18□□□□□ -0.46
TNFRSF1A-216ENST00000543995 FAM201AQ5SY85 155 aa12.18□□□□□ -0.46
TNFRSF1A-216ENST00000543995 DDI2Q5TDH0 399 aa12.18□□□□□ -0.46
TNFRSF1A-216ENST00000543995 ZNF529Q6P280 563 aa12.18□□□□□ -0.46
TNFRSF1A-216ENST00000543995 TMEM91Q6ZNR0 172 aa12.18□□□□□ -0.46
TNFRSF1A-216ENST00000543995 AQP3Q92482 292 aa12.18□□□□□ -0.46
TNFRSF1A-216ENST00000543995 SLITRK2Q9H156 845 aa12.18□□□□□ -0.46
TNFRSF1A-216ENST00000543995 NARFLQ9H6Q4 476 aa12.18□□□□□ -0.46
TNFRSF1A-216ENST00000543995 EXOSC4Q9NPD3 245 aaKnown RBP12.18□□□□□ -0.46
TNFRSF1A-216ENST00000543995 SETXQ7Z333 2677 aaKnown RBP12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 PPIAL4EA0A075B759 164 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 TRDV1A0A1B0GX56 115 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 VWC2LB2RUY7 222 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 RNF223E7ERA6 249 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 PPIAL4DF5H284 164 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 AKR7A2O43488 359 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 GPX5O75715 221 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 ARL6IP5O75915 188 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 CYB5AP00167 134 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 UCHL1P09936 223 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 PPIAL4FP0DN26 164 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 JUNBP17275 347 aaPredicted RBP12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 SRMP19623 302 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 CD80P33681 288 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 BTG1P62324 171 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 HOXA4Q00056 320 aaPredicted RBP12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 SFRP4Q6FHJ7 346 aaPredicted RBP12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 SLC25A26Q70HW3 274 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms