RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 AQP2P41181 271 aa7.28□□□□□ -1.24
USP28-205ENST00000537706 RPS6KA3P51812 740 aa7.28□□□□□ -1.24
USP28-205ENST00000537706 SLC35B1P78383 322 aa7.28□□□□□ -1.24
USP28-205ENST00000537706 ZIK1Q3SY52 487 aaPredicted RBP7.28□□□□□ -1.24
USP28-205ENST00000537706 ABCA11PQ4W5N1 156 aa7.28□□□□□ -1.24
USP28-205ENST00000537706 C10orf99Q6UWK7 81 aa7.28□□□□□ -1.24
USP28-205ENST00000537706 THAP5Q7Z6K1 395 aa7.28□□□□□ -1.24
USP28-205ENST00000537706 LHFPL4Q7Z7J7 247 aa7.28□□□□□ -1.24
USP28-205ENST00000537706 OR13D1Q8NGV5 346 aa7.28□□□□□ -1.24
USP28-205ENST00000537706 OR4Q3Q8NH05 313 aa7.28□□□□□ -1.24
USP28-205ENST00000537706 OR8S1Q8NH09 359 aa7.28□□□□□ -1.24
USP28-205ENST00000537706 LZICQ8WZA0 190 aa7.28□□□□□ -1.24
USP28-205ENST00000537706 C7orf34Q96L11 122 aa7.28□□□□□ -1.24
USP28-205ENST00000537706 COQ7Q99807 217 aa7.28□□□□□ -1.24
USP28-205ENST00000537706 REEP1Q9H902 201 aa7.28□□□□□ -1.24
USP28-205ENST00000537706 LIN7BQ9HAP6 207 aa7.28□□□□□ -1.24
USP28-205ENST00000537706 PTTG2Q9NZH5 202 aa7.28□□□□□ -1.24
USP28-205ENST00000537706 SAMHD1Q9Y3Z3 626 aaKnown RBP7.28□□□□□ -1.24
USP28-205ENST00000537706 ALMS1Q8TCU4 4167 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 GGT3PA6NGU5 568 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 FAM90A8PA6NJQ4 464 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 SLC16A6O15403 523 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 HCKP08631 526 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 DBHP09172 617 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 FUT1P19526 365 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 AQP1P29972 269 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 SLC25A1P53007 311 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 GABARAPL2P60520 117 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 CTXN1P60606 82 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 SELENOWP63302 87 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 CDK6Q00534 326 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 GK2Q14410 553 aaPredicted RBP7.27□□□□□ -1.25
USP28-205ENST00000537706 IFI44LQ53G44 452 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 RBM48Q5RL73 367 aaKnown RBP7.27□□□□□ -1.25
USP28-205ENST00000537706 KDM4DQ6B0I6 523 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 LINC00114Q6XXX2 140 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 DPY19L4Q7Z388 723 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 NFKBIDQ8NI38 313 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 CHPT1Q8WUD6 406 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 TAMM41Q96BW9 452 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 TPD52L3Q96J77 140 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 LYZL4Q96KX0 146 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 HDHD2Q9H0R4 259 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 U3KQV3 271 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 STARD9Q9P2P6 4700 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 SERPINB7O75635 380 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 OR7A10O76100 309 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 OR3A4PP47883 348 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 ARHGDIBP52566 201 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 RPL27P61353 136 aaKnown RBP7.27□□□□□ -1.25
USP28-205ENST00000537706 ESRRGP62508 458 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 ZNF691Q5VV52 312 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 FAHD1Q6P587 224 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 ZNF773Q6PK81 442 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 GLB1L2Q8IW92 636 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 SETD9Q8NE22 299 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 SGTBQ96EQ0 304 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 RAX2Q96IS3 184 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 DUX3Q96PT4 197 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 MRPL15Q9P015 296 aaKnown RBP7.27□□□□□ -1.25
USP28-205ENST00000537706 BLOC1S6Q9UL45 172 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 LRP12Q9Y561 859 aa7.27□□□□□ -1.25
USP28-205ENST00000537706 LOC100130705A0A1B0GUX0 176 aa7.26□□□□□ -1.25
USP28-205ENST00000537706 CD300LBA8K4G0 201 aa7.26□□□□□ -1.25
USP28-205ENST00000537706 PRR23D1E9PI22 279 aaPredicted RBP7.26□□□□□ -1.25
USP28-205ENST00000537706 M0QZK8 103 aa7.26□□□□□ -1.25
USP28-205ENST00000537706 ZNF701M0R085 212 aaPredicted RBP7.26□□□□□ -1.25
USP28-205ENST00000537706 PRR23D2P0DMB1 279 aaPredicted RBP7.26□□□□□ -1.25
USP28-205ENST00000537706 CAPZA1P52907 286 aa7.26□□□□□ -1.25
USP28-205ENST00000537706 LSM6P62312 80 aaKnown RBP7.26□□□□□ -1.25
USP28-205ENST00000537706 PPP1R8Q12972 351 aaKnown RBP7.26□□□□□ -1.25
USP28-205ENST00000537706 CCDC92Q53HC0 331 aaPredicted RBP7.26□□□□□ -1.25
USP28-205ENST00000537706 STUMQ69YW2 141 aa7.26□□□□□ -1.25
USP28-205ENST00000537706 REEP3Q6NUK4 255 aa7.26□□□□□ -1.25
USP28-205ENST00000537706 GPR141Q7Z602 305 aa7.26□□□□□ -1.25
USP28-205ENST00000537706 CYP4Z1Q86W10 505 aa7.26□□□□□ -1.25
USP28-205ENST00000537706 SGPP2Q8IWX5 399 aa7.26□□□□□ -1.25
USP28-205ENST00000537706 DYNAPQ8N1N2 210 aa7.26□□□□□ -1.25
USP28-205ENST00000537706 FBLIM1Q8WUP2 373 aa7.26□□□□□ -1.25
USP28-205ENST00000537706 HAO2Q9NYQ3 351 aa7.26□□□□□ -1.25
USP28-205ENST00000537706 NDUFAF4Q9P032 175 aa7.26□□□□□ -1.25
USP28-205ENST00000537706 A4GNTQ9UNA3 340 aa7.26□□□□□ -1.25
USP28-205ENST00000537706 CEPT1Q9Y6K0 416 aa7.26□□□□□ -1.25
USP28-205ENST00000537706 HSPE1-MOB4S4R3N1 261 aa7.26□□□□□ -1.25
USP28-205ENST00000537706 TRAPPC13A5PLN9 417 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 CCDC160A6NGH7 325 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 CPSF4LA6NMK7 179 aaKnown RBP7.25□□□□□ -1.25
USP28-205ENST00000537706 BHLHE40O14503 412 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 SIGLEC5O15389 551 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 DIRAS1O95057 198 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 LCATP04180 440 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 PRKACGP22612 351 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 CRHBPP24387 322 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 BRS3P32247 399 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 DAPP51397 102 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 ZBED5Q49AG3 693 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 ALG10Q5BKT4 473 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 ZNF788Q6ZQV5 615 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 C18orf65Q6ZTR6 163 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 TSEN54Q7Z6J9 526 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms