RNA–Protein interactions for RNA: ENST00000535648.5

TNC-210, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 7,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-210ENST00000535648 PCM1Q15154 2024 aa8.54□□□□□ -1.04
TNC-210ENST00000535648 GOSR1O95249 250 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 OR1C1Q15619 314 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 VAMP3Q15836 100 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 GLDNQ6ZMI3 551 aaPredicted RBP8.53□□□□□ -1.04
TNC-210ENST00000535648 MAMSTRQ6ZN01 415 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 NEIL1Q96FI4 390 aaPredicted RBP8.53□□□□□ -1.04
TNC-210ENST00000535648 OR8B4Q96RC9 309 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 RHOFQ9HBH0 211 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 PGA3P0DJD8 388 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 PJVKQ0ZLH3 352 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 UBE3DQ7Z6J8 389 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 GPR119Q8TDV5 335 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 ALKBH3Q96Q83 286 aaPredicted RBP8.53□□□□□ -1.04
TNC-210ENST00000535648 SARGQ9BW04 601 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 MMP26Q9NRE1 261 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 NTNG2Q96CW9 530 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 CMBLQ96DG6 245 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 KTI12Q96EK9 354 aaPredicted RBP8.53□□□□□ -1.04
TNC-210ENST00000535648 TRAPPC1Q9Y5R8 145 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 ADAMTSL3P82987 1691 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 LRP5O75197 1615 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 PRKNO60260 465 aaPredicted RBP8.53□□□□□ -1.04
TNC-210ENST00000535648 FGF2P09038 288 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 TRA2AQ13595 282 aaKnown RBP eCLIP8.53□□□□□ -1.04
TNC-210ENST00000535648 COTL1Q14019 142 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 IL11RAQ14626 422 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 LINC00303Q3SY05 128 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 Q56UQ5 140 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 ZNF766Q5HY98 468 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 FFAR4Q5NUL3 377 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 ANKRD34AQ69YU3 496 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 BCL7CQ8WUZ0 217 aaPredicted RBP8.53□□□□□ -1.04
TNC-210ENST00000535648 TMEM147Q9BVK8 224 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 PCED1AQ9H1Q7 454 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 TMED3Q9Y3Q3 217 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 ALG1L2C9J202 215 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 PYCARD-AS1I3L0S3 204 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 CRYBA1P05813 215 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 SFTA3P0C7M3 94 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 C12orf73Q69YU5 71 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 TNFRSF12AQ9NP84 129 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 LOC102723971A0A1B0GUV8 181 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 C2CD4DB7Z1M9 353 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 RBP4P02753 201 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 CEACAM6P40199 344 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 PRDX4Q13162 271 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 TMEM97Q5BJF2 176 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 C9orf62Q8N4C0 152 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 ARFGEF1Q9Y6D6 1849 aa8.53□□□□□ -1.04
TNC-210ENST00000535648 TOX4O94842 621 aa8.52□□□□□ -1.04
TNC-210ENST00000535648 RAB7AP51149 207 aa8.52□□□□□ -1.04
TNC-210ENST00000535648 MICBQ29980 383 aa8.52□□□□□ -1.04
TNC-210ENST00000535648 ZNF429Q86V71 674 aa8.52□□□□□ -1.04
TNC-210ENST00000535648 R3HDMLQ9H3Y0 253 aa8.52□□□□□ -1.04
TNC-210ENST00000535648 PRRC2BQ5JSZ5 2229 aaKnown RBP8.52□□□□□ -1.05
TNC-210ENST00000535648 RNASEK-C17orf49H0YIS7 233 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 CXCL10P02778 98 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 PRR35P0CG20 571 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 NAT2P11245 290 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 NME1P15531 152 aaKnown RBP8.52□□□□□ -1.05
TNC-210ENST00000535648 PPP1CAP62136 330 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 GUCA2AQ02747 115 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 TMEM267Q0VDI3 215 aaPredicted RBP8.52□□□□□ -1.05
TNC-210ENST00000535648 VAMP8Q9BV40 100 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 NXF2Q9GZY0 626 aaKnown RBP8.52□□□□□ -1.05
TNC-210ENST00000535648 SPTY2D1-AS1A0A0U1RR47 76 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 CDK2AP1O14519 115 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 ANKRD34CP0C6C1 535 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 CALHM3Q86XJ0 350 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 OR4F17Q8NGA8 305 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 PTP4A1Q93096 173 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 MISP3Q96FF7 219 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 AMMECR1Q9Y4X0 333 aaPredicted RBP8.52□□□□□ -1.05
TNC-210ENST00000535648 STRCQ7RTU9 1775 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 A0A0B4J2E0 115 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 TMEM272A0A1B0GTI8 110 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 A0A1B0GX12 115 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 OPRK1P41145 380 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 GPR137Q96N19 417 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 METTL12A8MUP2 240 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 M0R1X1 148 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 DHRS3O75911 302 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 TMEM196Q5HYL7 178 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 C11orf42Q8N5U0 333 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 OR5M9Q8NGP3 310 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 PLEKHB1Q9UF11 243 aaPredicted RBP8.52□□□□□ -1.05
TNC-210ENST00000535648 MTCH2Q9Y6C9 303 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 PAX5Q02548 391 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 HLA-BQ31612 363 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 MIDNQ504T8 468 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 TMEM88Q6PEY1 159 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 TMPRSS11FQ6ZWK6 438 aa8.52□□□□□ -1.05
TNC-210ENST00000535648 NOL4LQ96MY1 436 aaPredicted RBP8.52□□□□□ -1.05
TNC-210ENST00000535648 GPANK1O95872 356 aa8.51□□□□□ -1.05
TNC-210ENST00000535648 USF1P22415 310 aaPredicted RBP8.51□□□□□ -1.05
TNC-210ENST00000535648 SLC6A1P30531 599 aa8.51□□□□□ -1.05
TNC-210ENST00000535648 GALR1P47211 349 aa8.51□□□□□ -1.05
TNC-210ENST00000535648 COL19A1Q14993 1142 aa8.51□□□□□ -1.05
TNC-210ENST00000535648 PRSS36Q5K4E3 855 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms