RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 PDLIM3Q53GG5 364 aaPredicted RBP14.6□□□□□ -0.07
PCF11-206ENST00000533018 LCN1P1Q5VSP4 162 aa14.6□□□□□ -0.07
PCF11-206ENST00000533018 PLCXD3Q63HM9 321 aa14.6□□□□□ -0.07
PCF11-206ENST00000533018 DEGS2Q6QHC5 323 aa14.6□□□□□ -0.07
PCF11-206ENST00000533018 Q6ZSV7 163 aa14.6□□□□□ -0.07
PCF11-206ENST00000533018 FAM185AQ8N0U4 392 aa14.6□□□□□ -0.07
PCF11-206ENST00000533018 ZSCAN4Q8NAM6 433 aaPredicted RBP14.6□□□□□ -0.07
PCF11-206ENST00000533018 OR51E1Q8TCB6 317 aa14.6□□□□□ -0.07
PCF11-206ENST00000533018 PBOV1Q9GZY1 135 aa14.6□□□□□ -0.07
PCF11-206ENST00000533018 OR51I2Q9H344 312 aa14.6□□□□□ -0.07
PCF11-206ENST00000533018 METTL8Q9H825 291 aaKnown RBP14.6□□□□□ -0.07
PCF11-206ENST00000533018 SLC25A19Q9HC21 320 aa14.6□□□□□ -0.07
PCF11-206ENST00000533018 GPR84Q9NQS5 396 aa14.6□□□□□ -0.07
PCF11-206ENST00000533018 FAM206AQ9NX38 181 aa14.6□□□□□ -0.07
PCF11-206ENST00000533018 DNAJB9Q9UBS3 223 aa14.6□□□□□ -0.07
PCF11-206ENST00000533018 VPREB3Q9UKI3 123 aa14.6□□□□□ -0.07
PCF11-206ENST00000533018 PIGLQ9Y2B2 252 aa14.6□□□□□ -0.07
PCF11-206ENST00000533018 IGKV1D-17A0A075B6S4 117 aa14.59□□□□□ -0.07
PCF11-206ENST00000533018 A0A0U1RQV5 110 aa14.59□□□□□ -0.07
PCF11-206ENST00000533018 ACOD1A6NK06 481 aa14.59□□□□□ -0.07
PCF11-206ENST00000533018 M0R1W7 72 aa14.59□□□□□ -0.07
PCF11-206ENST00000533018 PSG2P11465 335 aa14.59□□□□□ -0.07
PCF11-206ENST00000533018 UBE2E1P51965 193 aa14.59□□□□□ -0.07
PCF11-206ENST00000533018 ZNF829Q3KNS6 432 aaPredicted RBP14.59□□□□□ -0.07
PCF11-206ENST00000533018 NCR3LG1Q68D85 454 aa14.59□□□□□ -0.07
PCF11-206ENST00000533018 HAGHLQ6PII5 290 aaPredicted RBP14.59□□□□□ -0.07
PCF11-206ENST00000533018 C1orf122Q6ZSJ8 110 aa14.59□□□□□ -0.07
PCF11-206ENST00000533018 OR5A2Q8NGI9 324 aa14.59□□□□□ -0.07
PCF11-206ENST00000533018 RBM4BQ9BQ04 359 aaKnown RBP14.59□□□□□ -0.07
PCF11-206ENST00000533018 MMP27Q9H306 513 aa14.59□□□□□ -0.07
PCF11-206ENST00000533018 PAPOLBQ9NRJ5 636 aaKnown RBP14.59□□□□□ -0.07
PCF11-206ENST00000533018 TMEM14AQ9Y6G1 99 aa14.59□□□□□ -0.07
PCF11-206ENST00000533018 ZNF254O75437 659 aa14.58□□□□□ -0.08
PCF11-206ENST00000533018 CLPXO76031 633 aa14.58□□□□□ -0.08
PCF11-206ENST00000533018 FAHP16930 419 aa14.58□□□□□ -0.08
PCF11-206ENST00000533018 TGFBR2P37173 567 aa14.58□□□□□ -0.08
PCF11-206ENST00000533018 RIDAP52758 137 aaKnown RBP14.58□□□□□ -0.08
PCF11-206ENST00000533018 CRISP1P54107 249 aa14.58□□□□□ -0.08
PCF11-206ENST00000533018 PROK1P58294 105 aa14.58□□□□□ -0.08
PCF11-206ENST00000533018 ESRRGP62508 458 aa14.58□□□□□ -0.08
PCF11-206ENST00000533018 DNAL1Q4LDG9 190 aa14.58□□□□□ -0.08
PCF11-206ENST00000533018 TRPM8Q7Z2W7 1104 aa14.58□□□□□ -0.08
PCF11-206ENST00000533018 ZNF679Q8IYX0 411 aa14.58□□□□□ -0.08
PCF11-206ENST00000533018 OR5R1Q8NH85 324 aa14.58□□□□□ -0.08
PCF11-206ENST00000533018 ASB17Q8WXJ9 295 aa14.58□□□□□ -0.08
PCF11-206ENST00000533018 AQP3Q92482 292 aa14.58□□□□□ -0.08
PCF11-206ENST00000533018 TNFRSF14Q92956 283 aa14.58□□□□□ -0.08
PCF11-206ENST00000533018 PPP1R14AQ96A00 147 aa14.58□□□□□ -0.08
PCF11-206ENST00000533018 OR8B4Q96RC9 309 aa14.58□□□□□ -0.08
PCF11-206ENST00000533018 PPA2Q9H2U2 334 aa14.58□□□□□ -0.08
PCF11-206ENST00000533018 H2AFY2Q9P0M6 372 aaPredicted RBP14.58□□□□□ -0.08
PCF11-206ENST00000533018 ENPP5Q9UJA9 477 aa14.58□□□□□ -0.08
PCF11-206ENST00000533018 COPS3Q9UNS2 423 aa14.58□□□□□ -0.08
PCF11-206ENST00000533018 OR5B21A6NL26 309 aa14.57□□□□□ -0.08
PCF11-206ENST00000533018 ANGPTL7O43827 346 aa14.57□□□□□ -0.08
PCF11-206ENST00000533018 MTRF1O75570 445 aaKnown RBP14.57□□□□□ -0.08
PCF11-206ENST00000533018 NRASP01111 189 aa14.57□□□□□ -0.08
PCF11-206ENST00000533018 ATP6V1B1P15313 513 aa14.57□□□□□ -0.08
PCF11-206ENST00000533018 ACSM1Q08AH1 577 aa14.57□□□□□ -0.08
PCF11-206ENST00000533018 ZNF684Q5T5D7 378 aa14.57□□□□□ -0.08
PCF11-206ENST00000533018 ASPHD2Q6ICH7 369 aa14.57□□□□□ -0.08
PCF11-206ENST00000533018 OR5D13Q8NGL4 314 aa14.57□□□□□ -0.08
PCF11-206ENST00000533018 DNAJC9Q8WXX5 260 aa14.57□□□□□ -0.08
PCF11-206ENST00000533018 CNN2Q99439 309 aaKnown RBP14.57□□□□□ -0.08
PCF11-206ENST00000533018 RASL12Q9NYN1 266 aa14.57□□□□□ -0.08
PCF11-206ENST00000533018 SF3B6Q9Y3B4 125 aaKnown RBP14.57□□□□□ -0.08
PCF11-206ENST00000533018 MAB21L2Q9Y586 359 aa14.57□□□□□ -0.08
PCF11-206ENST00000533018 CCDC182A6NF36 153 aa14.56□□□□□ -0.08
PCF11-206ENST00000533018 RFPL4AA6NLU0 287 aa14.56□□□□□ -0.08
PCF11-206ENST00000533018 PRR32B1ATL7 298 aa14.56□□□□□ -0.08
PCF11-206ENST00000533018 RFPL4AL1F8VTS6 287 aa14.56□□□□□ -0.08
PCF11-206ENST00000533018 H3BUX3 64 aa14.56□□□□□ -0.08
PCF11-206ENST00000533018 HAAOP46952 286 aa14.56□□□□□ -0.08
PCF11-206ENST00000533018 ACTR3P61158 418 aa14.56□□□□□ -0.08
PCF11-206ENST00000533018 ROM1Q03395 351 aa14.56□□□□□ -0.08
PCF11-206ENST00000533018 MFGE8Q08431 387 aaPredicted RBP14.56□□□□□ -0.08
PCF11-206ENST00000533018 PTGES3Q15185 160 aaKnown RBP14.56□□□□□ -0.08
PCF11-206ENST00000533018 OCLNQ16625 522 aa14.56□□□□□ -0.08
PCF11-206ENST00000533018 SMIM21Q3B7S5 101 aa14.56□□□□□ -0.08
PCF11-206ENST00000533018 OR51G2Q8NGK0 314 aa14.56□□□□□ -0.08
PCF11-206ENST00000533018 ZNF488Q96MN9 340 aa14.56□□□□□ -0.08
PCF11-206ENST00000533018 PRRG3Q9BZD7 231 aa14.56□□□□□ -0.08
PCF11-206ENST00000533018 C16orf95Q9H693 158 aa14.56□□□□□ -0.08
PCF11-206ENST00000533018 NUFIP1Q9UHK0 495 aaKnown RBP14.56□□□□□ -0.08
PCF11-206ENST00000533018 POMPQ9Y244 141 aa14.56□□□□□ -0.08
PCF11-206ENST00000533018 TRBV23-1A0A0A0MS06 115 aa14.55□□□□□ -0.08
PCF11-206ENST00000533018 TCRBV3S1A0A5B6 114 aa14.55□□□□□ -0.08
PCF11-206ENST00000533018 SLC1A7O00341 560 aa14.55□□□□□ -0.08
PCF11-206ENST00000533018 PRKYO43930 277 aa14.55□□□□□ -0.08
PCF11-206ENST00000533018 DHRS3O75911 302 aa14.55□□□□□ -0.08
PCF11-206ENST00000533018 DAPP51397 102 aa14.55□□□□□ -0.08
PCF11-206ENST00000533018 CXCR4P61073 352 aa14.55□□□□□ -0.08
PCF11-206ENST00000533018 EGR3Q06889 387 aa14.55□□□□□ -0.08
PCF11-206ENST00000533018 LY6EQ16553 131 aa14.55□□□□□ -0.08
PCF11-206ENST00000533018 SLC35E4Q6ICL7 350 aa14.55□□□□□ -0.08
PCF11-206ENST00000533018 ACP7Q6ZNF0 438 aa14.55□□□□□ -0.08
PCF11-206ENST00000533018 ASRGL1Q7L266 308 aa14.55□□□□□ -0.08
PCF11-206ENST00000533018 MEPCEQ7L2J0 689 aaKnown RBP14.55□□□□□ -0.08
PCF11-206ENST00000533018 KRT74Q7RTS7 529 aa14.55□□□□□ -0.08
PCF11-206ENST00000533018 BCDIN3DQ7Z5W3 292 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms