RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 A0A1W2PR77 199 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 NUDT21O43809 227 aaKnown RBP8.53□□□□□ -1.04
VCAN-210ENST00000513960 IGKV3-11P04433 115 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 SRFP11831 508 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 BCKDHBP21953 392 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 CASP6P55212 293 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 UNC119Q13432 240 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 COL19A1Q14993 1142 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 CATSPERDQ86XM0 798 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 TMEM217Q8N7C4 229 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 MRPL24Q96A35 216 aaKnown RBP8.53□□□□□ -1.04
VCAN-210ENST00000513960 ADIPOR1Q96A54 375 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 BSCL2Q96G97 398 aaPredicted RBP8.53□□□□□ -1.04
VCAN-210ENST00000513960 CHRNA10Q9GZZ6 450 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 SLC35B3Q9H1N7 401 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 SLC26A1Q9H2B4 701 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 OPA3Q9H6K4 179 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 ATXN7O15265 892 aaPredicted RBP8.53□□□□□ -1.04
VCAN-210ENST00000513960 DUX1O43812 170 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 HEXBP07686 556 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 FCGR3AP08637 254 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 HLA-DOBP13765 273 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 INSM1Q01101 510 aaPredicted RBP8.53□□□□□ -1.04
VCAN-210ENST00000513960 TLE1Q04724 770 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 OGFOD3Q6PK18 319 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 FBXW12Q6X9E4 464 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 HOGA1Q86XE5 327 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 DMBX1Q8NFW5 382 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 RPS4Y2Q8TD47 263 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 ZDHHC8Q9ULC8 765 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 ST8SIA5O15466 376 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 TMEM225BP0DP42 221 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 CRABP1P29762 137 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 CSNK1EP49674 416 aaKnown RBP8.52□□□□□ -1.05
VCAN-210ENST00000513960 P2RY4P51582 365 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 SLC35A1P78382 337 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 HNF4GQ14541 408 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 C10orf91Q5T1B1 145 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 DNM1P34Q6PK57 102 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 BTNL8Q6UX41 500 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 DNM1P46Q6ZS02 220 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 RNF144BQ7Z419 303 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 TMEM123Q8N131 208 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 PAQR4Q8N4S7 273 aaPredicted RBP8.52□□□□□ -1.05
VCAN-210ENST00000513960 OR5L1Q8NGL2 311 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 MRGPRFQ96AM1 343 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 AQP10Q96PS8 301 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 NXT1Q9UKK6 140 aaKnown RBP8.52□□□□□ -1.05
VCAN-210ENST00000513960 KCNIP3Q9Y2W7 256 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 FAM221AA4D161 298 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 ALG1L2C9J202 215 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 RAMP1O60894 148 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 MT-ATP6P00846 226 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 FOLR2P14207 255 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 OPRM1P35372 400 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 RBP2P50120 134 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 ZNF239Q16600 458 aaKnown RBP8.52□□□□□ -1.05
VCAN-210ENST00000513960 FAHD2BQ6P2I3 314 aaPredicted RBP8.52□□□□□ -1.05
VCAN-210ENST00000513960 SPNS3Q6ZMD2 512 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 OR2G3Q8NGZ4 309 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 OR1L3Q8NH93 324 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 FAHD2AQ96GK7 314 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 RTN4RQ9BZR6 473 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 WWTR1Q9GZV5 400 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 SEBOXQ9HB31 216 aaPredicted RBP8.52□□□□□ -1.05
VCAN-210ENST00000513960 MYOZ1Q9NP98 299 aaPredicted RBP8.52□□□□□ -1.05
VCAN-210ENST00000513960 WASF3Q9UPY6 502 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 IGKV3D-11A0A0A0MRZ8 115 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 TMED7-TICAM2A0A0A6YYA0 188 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 F10P00742 488 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 TRGC2P03986 189 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 CD5P06127 495 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 NR2C1P13056 603 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 POLR2HP52434 150 aaKnown RBP8.52□□□□□ -1.05
VCAN-210ENST00000513960 HIST2H3PS2Q5TEC6 136 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 GGNBP1Q5YKI7 109 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 LRP11Q86VZ4 500 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 C9orf40Q8IXQ3 194 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 HAS2Q92819 552 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 TMEM230Q96A57 120 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 ZNF524Q96C55 264 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 GPR132Q9UNW8 380 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 TIMM10BQ9Y5J6 103 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 MTCH2Q9Y6C9 303 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 RP1P56715 2156 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 UNC13CQ8NB66 2214 aa8.52□□□□□ -1.05
VCAN-210ENST00000513960 THADAQ6YHU6 1953 aa8.51□□□□□ -1.05
VCAN-210ENST00000513960 TMEM131Q92545 1883 aa8.51□□□□□ -1.05
VCAN-210ENST00000513960 TGIF2-C20orf24A0A0A6YYL0 155 aa8.51□□□□□ -1.05
VCAN-210ENST00000513960 A0A1B0GTQ1 180 aa8.51□□□□□ -1.05
VCAN-210ENST00000513960 ZNF724A8MTY0 619 aa8.51□□□□□ -1.05
VCAN-210ENST00000513960 H0YL77 283 aa8.51□□□□□ -1.05
VCAN-210ENST00000513960 IFNA10P01566 189 aa8.51□□□□□ -1.05
VCAN-210ENST00000513960 BGLAPP02818 100 aa8.51□□□□□ -1.05
VCAN-210ENST00000513960 MELTFP08582 738 aa8.51□□□□□ -1.05
VCAN-210ENST00000513960 FPR2P25090 351 aa8.51□□□□□ -1.05
VCAN-210ENST00000513960 ALDH3B1P43353 468 aa8.51□□□□□ -1.05
VCAN-210ENST00000513960 GNMTQ14749 295 aa8.51□□□□□ -1.05
VCAN-210ENST00000513960 ZNF124Q15973 351 aa8.51□□□□□ -1.05
VCAN-210ENST00000513960 SGCBQ16585 318 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms