RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 NANPQ8TBE9 248 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 RPS4Y2Q8TD47 263 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 HES4Q9HCC6 221 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 AMBNQ9NP70 447 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 ERVK13-1Q9NX77 482 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 ERVK-18Q9QC07 812 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 CLN8Q9UBY8 286 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 OR5V1Q9UGF6 321 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 ZNF222Q9UK12 451 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 RPL36Q9Y3U8 105 aaKnown RBP8.05□□□□□ -1.12
RNF4-221ENST00000513643 AUP1Q9Y679 476 aa8.05□□□□□ -1.12
RNF4-221ENST00000513643 IGKV1D-17A0A075B6S4 117 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 IGKV1-27A0A075B6S5 117 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 IGHV3OR15-7A0A075B7D8 119 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 IGKV1-9A0A0C4DH69 117 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 A0A1B0GW55 424 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 hCG_1807616A0A1W2PRN6 198 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 DAPL1A0PJW8 107 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 H0YAE9 185 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 DVL1O14640 695 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 AKR7A2O43488 359 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 ADAM20O43506 726 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 SYT7O43581 403 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 CLIC3O95833 236 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 FADS2O95864 444 aaKnown RBP8.04□□□□□ -1.12
RNF4-221ENST00000513643 PLATP00750 562 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 LIPFP07098 398 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 DUX4L2P0CJ85 424 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 DUX4L3P0CJ86 424 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 DUX4L4P0CJ87 422 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 DUX4L5P0CJ88 424 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 DUX4L6P0CJ89 424 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 DUX4L7P0CJ90 424 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 PGA5P0DJD9 388 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 EPHA1P21709 976 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 IL18R1Q13478 541 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 DMRTC1Q5HYR2 192 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 TTC23Q5W5X9 447 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 CD276Q5ZPR3 534 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 CRIP3Q6Q6R5 217 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 DUX4L9Q6RFH8 374 aaPredicted RBP8.04□□□□□ -1.12
RNF4-221ENST00000513643 THAP5Q7Z6K1 395 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 LHFPL3Q86UP9 236 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 POC1AQ8NBT0 407 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 ZNF485Q8NCK3 441 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 C8orf46Q8TAG6 207 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 TECTBQ96PL2 329 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 HIST1H2AAQ96QV6 131 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 CCL13Q99616 98 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 NRIP2Q9BQI9 281 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 CHST5Q9GZS9 411 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 RASSF4Q9H2L5 321 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 PRDM13Q9H4Q3 707 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 ISG20L2Q9H9L3 353 aaKnown RBP8.04□□□□□ -1.12
RNF4-221ENST00000513643 SEBOXQ9HB31 216 aaPredicted RBP8.04□□□□□ -1.12
RNF4-221ENST00000513643 RASL12Q9NYN1 266 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 DUX4Q9UBX2 424 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 NKX1-2Q9UD57 310 aaPredicted RBP8.04□□□□□ -1.12
RNF4-221ENST00000513643 GNG8Q9UK08 70 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 HSPE1-MOB4S4R3N1 261 aa8.04□□□□□ -1.12
RNF4-221ENST00000513643 A0A1B0GVI7 797 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 LOC107986453A0A1B0GWG9 222 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 ANKRD61A6NGH8 418 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 A6NIN4 97 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 E9PI62 339 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 J3QT63 122 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 GPR37O15354 613 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 SIGLEC5O15389 551 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 TCF21O43680 179 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 ALX3O95076 343 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 VENTXO95231 258 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 ECDO95905 644 aaPredicted RBP8.03□□□□□ -1.12
RNF4-221ENST00000513643 UBCP0CG48 685 aaKnown RBP8.03□□□□□ -1.12
RNF4-221ENST00000513643 PSG2P11465 335 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 HILS1P60008 231 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 ACTA2P62736 377 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 ACTG2P63267 376 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 IL24Q13007 206 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 ALKBH1Q13686 389 aaKnown RBP8.03□□□□□ -1.12
RNF4-221ENST00000513643 DGUOKQ16854 277 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 LRRC36Q1X8D7 754 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 KLHL22Q53GT1 634 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 TMEM244Q5VVB8 128 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 HAGHLQ6PII5 290 aaPredicted RBP8.03□□□□□ -1.12
RNF4-221ENST00000513643 UTS2BQ765I0 119 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 ZNF573Q86YE8 665 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 CALHM1Q8IU99 346 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 PHC2Q8IXK0 858 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 FGFRL1Q8N441 504 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 BOLLQ8N9W6 283 aaKnown RBP8.03□□□□□ -1.12
RNF4-221ENST00000513643 DNAAF1Q8NEP3 725 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 ZNF555Q8NEP9 628 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 ZNF671Q8TAW3 534 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 ZFAND2BQ8WV99 257 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 PP6455Q8WZ26 134 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 TMEM158Q8WZ71 300 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 TFAP2CQ92754 450 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 ADAT3Q96EY9 351 aaPredicted RBP8.03□□□□□ -1.12
RNF4-221ENST00000513643 SDSLQ96GA7 329 aa8.03□□□□□ -1.12
RNF4-221ENST00000513643 C4orf36Q96KX1 117 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms