RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 KRR1Q13601 381 aaKnown RBP2.88□□□□□ -1.95
NUP54-209ENST00000510569 KLF5Q13887 457 aaPredicted RBP2.88□□□□□ -1.95
NUP54-209ENST00000510569 MAD2L1BPQ15013 274 aaPredicted RBP2.88□□□□□ -1.95
NUP54-209ENST00000510569 SHHQ15465 462 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 TOMM34Q15785 309 aaPredicted RBP2.88□□□□□ -1.95
NUP54-209ENST00000510569 DGUOKQ16854 277 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 TRIM16LQ309B1 348 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 SLC25A52Q3SY17 297 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 FAM74A3Q4VXF1 159 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 TP53I3Q53FA7 332 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 DRAM2Q6UX65 266 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 IL34Q6ZMJ4 242 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 Q6ZSR3 168 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 ZNF589Q86UQ0 364 aaPredicted RBP2.88□□□□□ -1.95
NUP54-209ENST00000510569 SLC35F2Q8IXU6 374 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 PUSL1Q8N0Z8 303 aaKnown RBP2.88□□□□□ -1.95
NUP54-209ENST00000510569 DHRSXQ8N5I4 330 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 ATP6V1C2Q8NEY4 427 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 OR51D1Q8NGF3 324 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 OR6K6Q8NGW6 343 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 OR11L1Q8NGX0 322 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 OR10J5Q8NHC4 309 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 LYPD6BQ8NI32 183 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 RFESDQ8TAC1 157 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 BLOC1S5Q8TDH9 187 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 RNASEH2CQ8TDP1 164 aaKnown RBP2.88□□□□□ -1.95
NUP54-209ENST00000510569 IL22RA2Q969J5 263 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 YIPF6Q96EC8 236 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 CCDC126Q96EE4 140 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 Q96MT0 163 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 SERPINB12Q96P63 405 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 NAA50Q9GZZ1 169 aaKnown RBP2.88□□□□□ -1.95
NUP54-209ENST00000510569 TLNRD1Q9H1K6 362 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 ALG9Q9H6U8 611 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 ABCB9Q9NP78 766 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 NLE1Q9NVX2 485 aaPredicted RBP2.88□□□□□ -1.95
NUP54-209ENST00000510569 CLN6Q9NWW5 311 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 SIGLEC8Q9NYZ4 499 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 BFARQ9NZS9 450 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 ARL2BPQ9Y2Y0 163 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 SRCAPQ6ZRS2 3230 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 ABCB11O95342 1321 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 KIAA1551Q9HCM1 1747 aa2.88□□□□□ -1.95
NUP54-209ENST00000510569 RLFQ13129 1914 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 RIC1Q4ADV7 1423 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 KIR2DL5BA0A0G2JN68 375 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 KIR2DL5BA0A0G2JPC4 375 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 M0QZK8 103 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 SHOX2O60902 331 aaPredicted RBP2.87□□□□□ -1.95
NUP54-209ENST00000510569 MPZL1O95297 269 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 KRT75O95678 551 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 CRYZL1O95825 349 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 CRHP06850 196 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 TACSTD2P09758 323 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 NBEAP1P0C6P0 100 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 LOXP28300 417 aaPredicted RBP2.87□□□□□ -1.95
NUP54-209ENST00000510569 GCAP28676 217 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 GNRHRP30968 328 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 DDOSTP39656 456 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 VHLP40337 213 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 CAV2P51636 162 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 TMEM33P57088 247 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 UBE2MP61081 183 aaKnown RBP2.87□□□□□ -1.95
NUP54-209ENST00000510569 TLE4Q04727 773 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 MLLT11Q13015 90 aaPredicted RBP2.87□□□□□ -1.95
NUP54-209ENST00000510569 VGLL4Q14135 290 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 POU6F1Q14863 301 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 GPNMBQ14956 572 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 MPPED2Q15777 294 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 ZIC1Q15915 447 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 PGGHGQ32M88 737 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 DMRTC1Q5HYR2 192 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 SOHLH1Q5JUK2 328 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 TRIQKQ629K1 86 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 FAM45BPQ6NSW5 357 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 NIPAL1Q6NVV3 410 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 CD200R1LQ6Q8B3 271 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 FAM131AQ6UXB0 335 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 SLC25A48Q6ZT89 311 aaKnown RBP2.87□□□□□ -1.95
NUP54-209ENST00000510569 FAM92BQ6ZTR7 304 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 APTXQ7Z2E3 356 aaKnown RBP2.87□□□□□ -1.95
NUP54-209ENST00000510569 DEFB132Q7Z7B7 95 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 DPPA2Q7Z7J5 298 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 MRPL52Q86TS9 123 aaKnown RBP2.87□□□□□ -1.95
NUP54-209ENST00000510569 HORMAD1Q86X24 394 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 RIMKLAQ8IXN7 391 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 CMTM1Q8IZ96 169 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 KIR2DL5AQ8N109 375 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 NATD1Q8N6N6 113 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 ITFG1Q8TB96 612 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 SYNPRQ8TBG9 265 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 ACER1Q8TDN7 264 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 AENQ8WTP8 325 aaKnown RBP2.87□□□□□ -1.95
NUP54-209ENST00000510569 STMN2Q93045 179 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 ART4Q93070 314 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 NEIL2Q969S2 332 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 CREB3L1Q96BA8 519 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 TLCD1Q96CP7 247 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 CXorf40BQ96DE9 158 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 TCEAL4Q96EI5 215 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms