RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 CLDN34H7C241 214 aa9.47□□□□□ -0.89
NEK1-206ENST00000510533 M0R1X1 148 aa9.47□□□□□ -0.89
NEK1-206ENST00000510533 MPC2O95563 127 aa9.47□□□□□ -0.89
NEK1-206ENST00000510533 PMCHP20382 165 aa9.47□□□□□ -0.89
NEK1-206ENST00000510533 IQCJQ1A5X6 159 aa9.47□□□□□ -0.89
NEK1-206ENST00000510533 FFAR4Q5NUL3 377 aa9.47□□□□□ -0.89
NEK1-206ENST00000510533 MRGPREQ86SM8 312 aa9.47□□□□□ -0.89
NEK1-206ENST00000510533 FGF14Q92915 247 aa9.47□□□□□ -0.89
NEK1-206ENST00000510533 PHYHIPLQ96FC7 376 aa9.47□□□□□ -0.89
NEK1-206ENST00000510533 NOL4LQ96MY1 436 aaPredicted RBP9.47□□□□□ -0.89
NEK1-206ENST00000510533 ZPBPQ9BS86 351 aa9.47□□□□□ -0.89
NEK1-206ENST00000510533 LRFN3Q9BTN0 628 aa9.47□□□□□ -0.89
NEK1-206ENST00000510533 DUS4LO95620 317 aaKnown RBP9.47□□□□□ -0.89
NEK1-206ENST00000510533 GNB2P62879 340 aa9.47□□□□□ -0.89
NEK1-206ENST00000510533 FAM3AP98173 230 aa9.47□□□□□ -0.89
NEK1-206ENST00000510533 SMAD4Q13485 552 aaKnown RBP9.47□□□□□ -0.89
NEK1-206ENST00000510533 C19orf35Q6ZS72 473 aa9.47□□□□□ -0.89
NEK1-206ENST00000510533 AMER3Q8N944 861 aa9.47□□□□□ -0.89
NEK1-206ENST00000510533 TP53I13Q8NBR0 393 aaPredicted RBP9.47□□□□□ -0.89
NEK1-206ENST00000510533 OR10D4PQ8NGN7 298 aa9.47□□□□□ -0.89
NEK1-206ENST00000510533 OR2T6Q8NHC8 308 aa9.47□□□□□ -0.89
NEK1-206ENST00000510533 TMEM37Q8WXS4 190 aa9.47□□□□□ -0.89
NEK1-206ENST00000510533 PIK3IP1Q96FE7 263 aa9.47□□□□□ -0.89
NEK1-206ENST00000510533 METTL12A8MUP2 240 aa9.46□□□□□ -0.89
NEK1-206ENST00000510533 TNFSF15O95150 251 aa9.46□□□□□ -0.89
NEK1-206ENST00000510533 MMP7P09237 267 aaPredicted RBP9.46□□□□□ -0.89
NEK1-206ENST00000510533 PRICKLE4Q2TBC4 344 aa9.46□□□□□ -0.89
NEK1-206ENST00000510533 MRM1Q6IN84 353 aaKnown RBP9.46□□□□□ -0.89
NEK1-206ENST00000510533 TOMM20LQ6UXN7 152 aa9.46□□□□□ -0.89
NEK1-206ENST00000510533 ADAT1Q9BUB4 502 aaKnown RBP9.46□□□□□ -0.89
NEK1-206ENST00000510533 SLC35B3Q9H1N7 401 aa9.46□□□□□ -0.89
NEK1-206ENST00000510533 DDX60LQ5H9U9 1706 aaKnown RBP9.46□□□□□ -0.89
NEK1-206ENST00000510533 RER1O15258 196 aa9.46□□□□□ -0.89
NEK1-206ENST00000510533 CCL7P80098 99 aa9.46□□□□□ -0.89
NEK1-206ENST00000510533 PDCD1Q15116 288 aa9.46□□□□□ -0.89
NEK1-206ENST00000510533 FA2HQ7L5A8 372 aa9.46□□□□□ -0.89
NEK1-206ENST00000510533 C17orf47Q8NEP4 570 aa9.46□□□□□ -0.89
NEK1-206ENST00000510533 OR10V1Q8NGI7 309 aa9.46□□□□□ -0.89
NEK1-206ENST00000510533 OR5C1Q8NGR4 320 aa9.46□□□□□ -0.89
NEK1-206ENST00000510533 MFRPQ9BY79 579 aa9.46□□□□□ -0.89
NEK1-206ENST00000510533 TOX4O94842 621 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 GALR1P47211 349 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 SNRPEP62304 92 aaKnown RBP9.46□□□□□ -0.9
NEK1-206ENST00000510533 SLC38A11Q08AI6 406 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 VMA21Q3ZAQ7 101 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 PRSS54Q6PEW0 395 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 NHLRC1Q6VVB1 395 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 C20orf196Q8IYI0 205 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 MMP24Q9Y5R2 645 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 SSC5DA1L4H1 1573 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 C3orf85A0A1B0GTC6 90 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 ANKRD20A5PA0PJZ0 165 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 NGFP01138 241 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 CEACAM6P40199 344 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 PAX5Q02548 391 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 TMEM241Q24JQ0 296 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 ALKBH6Q3KRA9 238 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 WIPI1Q5MNZ9 446 aaPredicted RBP9.46□□□□□ -0.9
NEK1-206ENST00000510533 SPEM1Q8N4L4 309 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 ZG16BQ96DA0 208 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 FAAP24Q9BTP7 215 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 NAA60Q9H7X0 242 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 ERRFI1Q9UJM3 462 aaPredicted RBP9.46□□□□□ -0.9
NEK1-206ENST00000510533 CBY3A6NI87 242 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 HMSDA8MTL9 139 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 H3BMH7 237 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 CDC14BO60729 498 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 LY86O95711 162 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 CDKN2AP42771 156 aaKnown RBP9.46□□□□□ -0.9
NEK1-206ENST00000510533 GGNBP1Q5YKI7 109 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 STUMQ69YW2 141 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 C11orf42Q8N5U0 333 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 PLAC1Q9HBJ0 212 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.46□□□□□ -0.9
NEK1-206ENST00000510533 TAAR3PQ9P1P4 343 aa9.46□□□□□ -0.9
NEK1-206ENST00000510533 MAP1LC3B2A6NCE7 125 aa9.45□□□□□ -0.9
NEK1-206ENST00000510533 RGS13O14921 159 aa9.45□□□□□ -0.9
NEK1-206ENST00000510533 TOX3O15405 576 aaPredicted RBP9.45□□□□□ -0.9
NEK1-206ENST00000510533 CTSVO60911 334 aa9.45□□□□□ -0.9
NEK1-206ENST00000510533 MYF5P13349 255 aa9.45□□□□□ -0.9
NEK1-206ENST00000510533 YBX1P67809 324 aaKnown RBP9.45□□□□□ -0.9
NEK1-206ENST00000510533 DEFB109BQ30KR1 87 aa9.45□□□□□ -0.9
NEK1-206ENST00000510533 DUSP18Q8NEJ0 188 aa9.45□□□□□ -0.9
NEK1-206ENST00000510533 MOB3AQ96BX8 217 aa9.45□□□□□ -0.9
NEK1-206ENST00000510533 MAP1LC3BQ9GZQ8 125 aa9.45□□□□□ -0.9
NEK1-206ENST00000510533 NARFLQ9H6Q4 476 aa9.45□□□□□ -0.9
NEK1-206ENST00000510533 ZNF275Q9NSD4 429 aaPredicted RBP9.45□□□□□ -0.9
NEK1-206ENST00000510533 LAMB1P07942 1786 aa9.45□□□□□ -0.9
NEK1-206ENST00000510533 A0A1B0GTH9 108 aa9.45□□□□□ -0.9
NEK1-206ENST00000510533 GABRG2P18507 467 aa9.45□□□□□ -0.9
NEK1-206ENST00000510533 RPL13AP40429 203 aaKnown RBP9.45□□□□□ -0.9
NEK1-206ENST00000510533 IL13RA2Q14627 380 aa9.45□□□□□ -0.9
NEK1-206ENST00000510533 IGFBP7Q16270 282 aa9.45□□□□□ -0.9
NEK1-206ENST00000510533 C6orf201Q7Z4U5 140 aa9.45□□□□□ -0.9
NEK1-206ENST00000510533 LINC01555Q8NAE3 123 aa9.45□□□□□ -0.9
NEK1-206ENST00000510533 TMPRSS13Q9BYE2 586 aa9.45□□□□□ -0.9
NEK1-206ENST00000510533 VN1R1Q9GZP7 353 aa9.45□□□□□ -0.9
NEK1-206ENST00000510533 AKAP11Q9UKA4 1901 aa9.45□□□□□ -0.9
NEK1-206ENST00000510533 SDHBP21912 280 aa9.45□□□□□ -0.9
NEK1-206ENST00000510533 USF1P22415 310 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms