RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 TMEM185AQ8NFB2 350 aa9.43□□□□□ -0.9
HMGCS1-204ENST00000507293 THTPAQ9BU02 230 aa9.43□□□□□ -0.9
HMGCS1-204ENST00000507293 TTTY10Q9BZA0 68 aa9.43□□□□□ -0.9
HMGCS1-204ENST00000507293 SLC25A19Q9HC21 320 aa9.43□□□□□ -0.9
HMGCS1-204ENST00000507293 MAB21L2Q9Y586 359 aa9.43□□□□□ -0.9
HMGCS1-204ENST00000507293 A0A0U1RQV5 110 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 TMEM269A0A1B0GVZ9 245 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 CCDC182A6NF36 153 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 OR5B21A6NL26 309 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 AQP12BA6NM10 295 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 PRR32B1ATL7 298 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 H0YAE9 185 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 H3BUX3 64 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 FAHP16930 419 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 CAPZA1P52907 286 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 PLCXD3Q63HM9 321 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 KCTD18Q6PI47 426 aaPredicted RBP9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 HAGHLQ6PII5 290 aaPredicted RBP9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 MOB3CQ70IA8 216 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 KRT74Q7RTS7 529 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 AQP12AQ8IXF9 295 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 CCDC197Q8NCU1 140 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 BEND2Q8NDZ0 799 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 ZNF671Q8TAW3 534 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 OR51E1Q8TCB6 317 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 C17orf50Q8WW18 174 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 AQP3Q92482 292 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 SDSLQ96GA7 329 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 OR8B4Q96RC9 309 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 YIPF3Q9GZM5 350 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 PBOV1Q9GZY1 135 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 YY1AP1Q9H869 796 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 GPR84Q9NQS5 396 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 C19orf12Q9NSK7 152 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 COPS3Q9UNS2 423 aa9.42□□□□□ -0.9
HMGCS1-204ENST00000507293 TRBV23-1A0A0A0MS06 115 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 ACOD1A6NK06 481 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 GSC2O15499 205 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 ANGPTL7O43827 346 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 IGLV3-1P01715 115 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 ANXA8P13928 327 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 ATP6V1B1P15313 513 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 MFGE8Q08431 387 aaPredicted RBP9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 RIPPLY1Q0D2K3 151 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 SNAPC1Q16533 368 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 LY6EQ16553 131 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 C2orf68Q2NKX9 166 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 LCN1P1Q5VSP4 162 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 SLC35E4Q6ICL7 350 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 DEGS2Q6QHC5 323 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 ACP7Q6ZNF0 438 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 C1QL4Q86Z23 238 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 POC1AQ8NBT0 407 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 OR5A2Q8NGI9 324 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 OR51G2Q8NGK0 314 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 OR5D13Q8NGL4 314 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 FAM110DQ8TAY7 271 aaPredicted RBP9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 PPP1R14AQ96A00 147 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 ZNF488Q96MN9 340 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 TEAD3Q99594 435 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 SSX3Q99909 188 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 TEX12Q9BXU0 123 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 MROQ9BYG7 248 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 C1orf21Q9H246 121 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 TVP23BQ9NYZ1 205 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 ENPP5Q9UJA9 477 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 PIGLQ9Y2B2 252 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 SF3B6Q9Y3B4 125 aaKnown RBP9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 VWFP04275 2813 aa9.41□□□□□ -0.9
HMGCS1-204ENST00000507293 DSCAML1Q8TD84 2053 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 A0A0G2JK05 382 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 RFPL4AA6NLU0 287 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 RFPL4AL1F8VTS6 287 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 SYNGR1O43759 233 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 FKBP6O75344 327 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 ZNF254O75437 659 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 MTRF1O75570 445 aaKnown RBP9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 FAM107AO95990 144 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 TTRP02766 147 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 CSF1P09603 554 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 GABRA5P31644 462 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 CEBPDP49716 269 aaPredicted RBP9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 RIDAP52758 137 aaKnown RBP9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 CBX1P83916 185 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 ROM1Q03395 351 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 LRRC75BQ2VPJ9 315 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 SMIM21Q3B7S5 101 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 ZNF829Q3KNS6 432 aaPredicted RBP9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 ZBTB37Q5TC79 503 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 SPATA24Q86W54 205 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 MKXQ8IYA7 352 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 ZNF679Q8IYX0 411 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 CD177Q8N6Q3 437 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 RORBQ92753 470 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 ITFG2Q969R8 447 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 AJUBAQ96IF1 538 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 RASL12Q9NYN1 266 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 DNAJB9Q9UBS3 223 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 FBLN5Q9UBX5 448 aa9.4□□□□□ -0.9
HMGCS1-204ENST00000507293 NUFIP1Q9UHK0 495 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms