RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 SERPINA2P20848 420 aa15.04■□□□□ -0
SQSTM1-211ENST00000506690 ERVFRD-1P60508 538 aa15.04■□□□□ -0
SQSTM1-211ENST00000506690 DAZLQ92904 295 aaKnown RBP15.04■□□□□ -0
SQSTM1-211ENST00000506690 RELTQ969Z4 430 aa15.04■□□□□ -0
SQSTM1-211ENST00000506690 SHDQ96IW2 340 aa15.04■□□□□ -0
SQSTM1-211ENST00000506690 TGM7Q96PF1 710 aa15.04■□□□□ -0
SQSTM1-211ENST00000506690 UNKLQ9H9P5 680 aaKnown RBP15.04■□□□□ -0
SQSTM1-211ENST00000506690 FTCDNL1E5RQL4 147 aa15.04■□□□□ -0
SQSTM1-211ENST00000506690 MS4A18H0YCH9 400 aa15.04■□□□□ -0
SQSTM1-211ENST00000506690 IL11P20809 199 aa15.04■□□□□ -0
SQSTM1-211ENST00000506690 TAGLN2P37802 199 aaKnown RBP15.04■□□□□ -0
SQSTM1-211ENST00000506690 MS4A18Q3C1V0 323 aa15.04■□□□□ -0
SQSTM1-211ENST00000506690 PLXDC2Q6UX71 529 aa15.04■□□□□ -0
SQSTM1-211ENST00000506690 ZNF248Q8NDW4 579 aa15.04■□□□□ -0
SQSTM1-211ENST00000506690 CCDC54Q8NEL0 328 aa15.04■□□□□ -0
SQSTM1-211ENST00000506690 OR13D1Q8NGV5 346 aa15.04■□□□□ -0
SQSTM1-211ENST00000506690 SSC4DQ8WTU2 575 aa15.04■□□□□ -0
SQSTM1-211ENST00000506690 ADIPOR1Q96A54 375 aa15.04■□□□□ -0
SQSTM1-211ENST00000506690 IER2Q9BTL4 223 aa15.04■□□□□ -0
SQSTM1-211ENST00000506690 NELFAQ9H3P2 528 aa15.04■□□□□ -0
SQSTM1-211ENST00000506690 DECR2Q9NUI1 292 aa15.04■□□□□ -0
SQSTM1-211ENST00000506690 HS3ST3B1Q9Y662 390 aa15.04■□□□□ -0
SQSTM1-211ENST00000506690 A0A087X0M5 115 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 A0A1B0GV50 99 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 A0A1B0GX30 115 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 OR5H15A6NDH6 313 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 OR5H1A6NKK0 313 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 ZNF726A6NNF4 738 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 ALG1L2C9J202 215 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 HSD17B6O14756 317 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 AHSA1O95433 338 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 HPNP05981 417 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 HEXBP07686 556 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 POU2F2P09086 479 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 AFF3P51826 1226 aaKnown RBP15.03■□□□□ -0
SQSTM1-211ENST00000506690 HSD17B11Q8NBQ5 300 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 RNASE11Q8TAA1 199 aaKnown RBP15.03■□□□□ -0
SQSTM1-211ENST00000506690 FAM213BQ8TBF2 198 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 C11orf40Q8WZ69 217 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 SOX7Q9BT81 388 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 TCFL5Q9UL49 500 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 A0A1W2PQD3 144 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 RBFOX3A6NFN3 312 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 TSTD3H0UI37 97 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 TNFRSF10CO14798 259 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 APODP05090 189 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 ZNF17P17021 662 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 LBHQ53QV2 105 aaPredicted RBP15.03■□□□□ -0
SQSTM1-211ENST00000506690 C9orf50Q5SZB4 431 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 OR51T1Q8NGJ9 327 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 JSRP1Q96MG2 331 aaPredicted RBP15.03■□□□□ -0
SQSTM1-211ENST00000506690 UNC80Q8N2C7 3258 aa15.03■□□□□ -0
SQSTM1-211ENST00000506690 IGKV1D-8A0A087WSZ0 117 aa15.02■□□□□ -0
SQSTM1-211ENST00000506690 NPIPA5E9PKD4 350 aa15.02■□□□□ -0
SQSTM1-211ENST00000506690 TERTO14746 1132 aaKnown RBP15.02■□□□□ -0
SQSTM1-211ENST00000506690 RRP8O43159 456 aaKnown RBP15.02■□□□□ -0
SQSTM1-211ENST00000506690 HCKP08631 526 aa15.02■□□□□ -0
SQSTM1-211ENST00000506690 TMEM182Q6ZP80 229 aaPredicted RBP15.02■□□□□ -0
SQSTM1-211ENST00000506690 C2orf88Q9BSF0 95 aa15.02■□□□□ -0
SQSTM1-211ENST00000506690 ZNF2Q9BSG1 426 aaPredicted RBP15.02■□□□□ -0
SQSTM1-211ENST00000506690 PECRQ9BY49 303 aa15.02■□□□□ -0
SQSTM1-211ENST00000506690 SIRT7Q9NRC8 400 aa15.02■□□□□ -0
SQSTM1-211ENST00000506690 NPIPA1Q9UND3 350 aa15.02■□□□□ -0
SQSTM1-211ENST00000506690 KCNIP3Q9Y2W7 256 aa15.02■□□□□ -0
SQSTM1-211ENST00000506690 TGIF2-C20orf24A0A0A6YYL0 155 aa15.02□□□□□ -0.01
SQSTM1-211ENST00000506690 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.02□□□□□ -0.01
SQSTM1-211ENST00000506690 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.02□□□□□ -0.01
SQSTM1-211ENST00000506690 BTBD17A6NE02 478 aa15.02□□□□□ -0.01
SQSTM1-211ENST00000506690 PTBP3O95758 552 aaKnown RBP15.02□□□□□ -0.01
SQSTM1-211ENST00000506690 DAP3P51398 398 aaKnown RBP15.02□□□□□ -0.01
SQSTM1-211ENST00000506690 UBE2KP61086 200 aa15.02□□□□□ -0.01
SQSTM1-211ENST00000506690 NKX6-1P78426 367 aaPredicted RBP15.02□□□□□ -0.01
SQSTM1-211ENST00000506690 CCL20P78556 96 aa15.02□□□□□ -0.01
SQSTM1-211ENST00000506690 ZP4Q12836 540 aa15.02□□□□□ -0.01
SQSTM1-211ENST00000506690 HAGHQ16775 308 aa15.02□□□□□ -0.01
SQSTM1-211ENST00000506690 HIST2H3PS2Q5TEC6 136 aa15.02□□□□□ -0.01
SQSTM1-211ENST00000506690 GRINAQ7Z429 371 aa15.02□□□□□ -0.01
SQSTM1-211ENST00000506690 SLC37A2Q8TED4 501 aa15.02□□□□□ -0.01
SQSTM1-211ENST00000506690 MOB1AQ9H8S9 216 aa15.02□□□□□ -0.01
SQSTM1-211ENST00000506690 SERPINE3A8MV23 424 aa15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 XRCC2O43543 280 aa15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 TRGC2P03986 189 aa15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 SRP19P09132 144 aaKnown RBP15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 DLK1P80370 383 aa15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 NHLH2Q02577 135 aa15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 PDZD11Q5EBL8 140 aa15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 SPSB3Q6PJ21 355 aa15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 BEND4Q6ZU67 534 aa15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 METTL27Q8N6F8 245 aaPredicted RBP15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 OR8G5Q8NG78 346 aa15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 MMABQ96EY8 250 aaPredicted RBP15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 OR8D2Q9GZM6 311 aa15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 LRP4O75096 1905 aa15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 DIRAS3O95661 229 aa15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 IL12BP29460 328 aa15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 BLVRBP30043 206 aaPredicted RBP15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 SPCS3P61009 180 aa15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 SSX2Q16385 188 aa15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 TANGO2Q6ICL3 276 aa15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 ABHD12BQ7Z5M8 362 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms