RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 ZNF550Q7Z398 422 aa4.23□□□□□ -1.73
PRKD3-210ENST00000494667 ZNF615Q8N8J6 731 aa4.23□□□□□ -1.73
PRKD3-210ENST00000494667 OR4B1Q8NGF8 309 aa4.23□□□□□ -1.73
PRKD3-210ENST00000494667 OR6N2Q8NGY6 317 aa4.23□□□□□ -1.73
PRKD3-210ENST00000494667 OR51A7Q8NH64 312 aa4.23□□□□□ -1.73
PRKD3-210ENST00000494667 FNDC9Q8TBE3 224 aa4.23□□□□□ -1.73
PRKD3-210ENST00000494667 ZPLD1Q8TCW7 415 aa4.23□□□□□ -1.73
PRKD3-210ENST00000494667 SSC4DQ8WTU2 575 aa4.23□□□□□ -1.73
PRKD3-210ENST00000494667 TSLPQ969D9 159 aa4.23□□□□□ -1.73
PRKD3-210ENST00000494667 C8orf44Q96CB5 159 aa4.23□□□□□ -1.73
PRKD3-210ENST00000494667 CTHRC1Q96CG8 243 aa4.23□□□□□ -1.73
PRKD3-210ENST00000494667 ANAPC16Q96DE5 110 aa4.23□□□□□ -1.73
PRKD3-210ENST00000494667 IL17FQ96PD4 163 aa4.23□□□□□ -1.73
PRKD3-210ENST00000494667 NMNAT3Q96T66 252 aa4.23□□□□□ -1.73
PRKD3-210ENST00000494667 SERINC1Q9NRX5 453 aa4.23□□□□□ -1.73
PRKD3-210ENST00000494667 OR6C3Q9NZP0 311 aa4.23□□□□□ -1.73
PRKD3-210ENST00000494667 CDC42EP3Q9UKI2 254 aa4.23□□□□□ -1.73
PRKD3-210ENST00000494667 CYP8B1Q9UNU6 501 aa4.23□□□□□ -1.73
PRKD3-210ENST00000494667 DHDHQ9UQ10 334 aa4.23□□□□□ -1.73
PRKD3-210ENST00000494667 MRPS16Q9Y3D3 137 aaKnown RBP4.23□□□□□ -1.73
PRKD3-210ENST00000494667 LRRK1Q38SD2 2015 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 MUC22E2RYF6 1773 aaPredicted RBP4.22□□□□□ -1.73
PRKD3-210ENST00000494667 TRAV9-1A0A075B6T8 112 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 GJB5O95377 273 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 EOMESO95936 686 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 IGHMP01871 453 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 CKMP06732 381 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 PTGER4P35408 488 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 CDKN2AP42771 156 aaKnown RBP4.22□□□□□ -1.73
PRKD3-210ENST00000494667 ELLP55199 621 aaPredicted RBP4.22□□□□□ -1.73
PRKD3-210ENST00000494667 CCL20P78556 96 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 BAXQ07812 192 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 AGBL4Q5VU57 503 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 GLB1LQ6UWU2 654 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 LHFPL4Q7Z7J7 247 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 ZNF100Q8IYN0 542 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 FAM185AQ8N0U4 392 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 FBXL14Q8N1E6 418 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 C11orf42Q8N5U0 333 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 WFDC5Q8TCV5 224 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 CABLES2Q9BTV7 478 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 MRPL13Q9BYD1 178 aaKnown RBP4.22□□□□□ -1.73
PRKD3-210ENST00000494667 KCNK15Q9H427 330 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 MKKSQ9NPJ1 570 aaPredicted RBP4.22□□□□□ -1.73
PRKD3-210ENST00000494667 TM7SF3Q9NS93 570 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 ZNF705GA8MUZ8 300 aaPredicted RBP4.22□□□□□ -1.73
PRKD3-210ENST00000494667 C9orf172C9J069 976 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 J3QR06 171 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 HRASP01112 189 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 WASP42768 502 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 IAH1Q2TAA2 248 aaPredicted RBP4.22□□□□□ -1.73
PRKD3-210ENST00000494667 ELOA3BQ3SY89 546 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 TMEM184AQ6ZMB5 413 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 TMEM144Q7Z5S9 345 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 KMT5CQ86Y97 462 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 LRRC25Q8N386 305 aaPredicted RBP4.22□□□□□ -1.73
PRKD3-210ENST00000494667 LILRA3Q8N6C8 439 aaPredicted RBP4.22□□□□□ -1.73
PRKD3-210ENST00000494667 CDRT4Q8N9R6 151 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 LINC01555Q8NAE3 123 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 SLC16A11Q8NCK7 471 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 ELOA3Q8NG57 546 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 NT5CQ8TCD5 201 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 TMEM106BQ9NUM4 274 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 GRHPRQ9UBQ7 328 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 SLC5A6Q9Y289 635 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 COX11Q9Y6N1 276 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 TCF20Q9UGU0 1960 aaKnown RBP4.22□□□□□ -1.73
PRKD3-210ENST00000494667 NSG1A0A0A6YYJ2 146 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 LIPT2A6NK58 231 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 C4orf51C9J302 202 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 FOXS1O43638 330 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 PRICKLE3O43900 615 aaPredicted RBP4.22□□□□□ -1.73
PRKD3-210ENST00000494667 WDR1O75083 606 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 NKX2-2O95096 273 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 CTXN2P0C2S0 81 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 ASAH2BP0C7U1 165 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 SCGB1A1P11684 91 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 KLK2P20151 261 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 CEACAM3P40198 252 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 MPLP40238 635 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 SSR2P43308 183 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 COMPP49747 757 aaPredicted RBP4.22□□□□□ -1.73
PRKD3-210ENST00000494667 CARD18P57730 90 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 DPTQ07507 201 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 MESP2Q0VG99 397 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 ENPP2Q13822 863 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 C1QL3Q5VWW1 255 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 WDR25Q64LD2 544 aaPredicted RBP4.22□□□□□ -1.73
PRKD3-210ENST00000494667 MYPOPQ86VE0 399 aaPredicted RBP4.22□□□□□ -1.73
PRKD3-210ENST00000494667 ZNF721Q8TF20 911 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 SMIM12Q96EX1 92 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 C1orf147Q96MC9 270 aaPredicted RBP4.22□□□□□ -1.73
PRKD3-210ENST00000494667 ALKBH7Q9BT30 221 aaPredicted RBP4.22□□□□□ -1.73
PRKD3-210ENST00000494667 LMF2Q9BU23 707 aaKnown RBP4.22□□□□□ -1.73
PRKD3-210ENST00000494667 NAT8Q9UHE5 227 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 SAA2-SAA4A0A096LPE2 208 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 IGHV2OR16-5A0A0B4J2B6 119 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 MAP1LC3B2A6NCE7 125 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 VENTXO95231 258 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 HIST1H1DP16402 221 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms