RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 AKR7LQ8NHP1 331 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 SIRT5Q9NXA8 310 aa18.01■□□□□ 0.47
RNF40-203ENST00000493683 DNAJB12Q9NXW2 375 aaKnown RBP18.01■□□□□ 0.47
RNF40-203ENST00000493683 IGHA2P01877 340 aa18■□□□□ 0.47
RNF40-203ENST00000493683 FAM3AP98173 230 aa18■□□□□ 0.47
RNF40-203ENST00000493683 MYBPHQ13203 477 aa18■□□□□ 0.47
RNF40-203ENST00000493683 ETFBKMTQ8IXQ9 262 aa18■□□□□ 0.47
RNF40-203ENST00000493683 FGF14Q92915 247 aa18■□□□□ 0.47
RNF40-203ENST00000493683 CACNA1SQ13698 1873 aa18■□□□□ 0.47
RNF40-203ENST00000493683 HOXC4P09017 264 aaPredicted RBP18■□□□□ 0.47
RNF40-203ENST00000493683 SLC38A11Q08AI6 406 aa18■□□□□ 0.47
RNF40-203ENST00000493683 TAAR9Q96RI9 348 aa18■□□□□ 0.47
RNF40-203ENST00000493683 NAA60Q9H7X0 242 aa18■□□□□ 0.47
RNF40-203ENST00000493683 KCNE3Q9Y6H6 103 aa18■□□□□ 0.47
RNF40-203ENST00000493683 JMJD6Q6NYC1 403 aaPredicted RBP18■□□□□ 0.47
RNF40-203ENST00000493683 WDR73Q6P4I2 378 aa18■□□□□ 0.47
RNF40-203ENST00000493683 ZNF66Q6ZN08 573 aa18■□□□□ 0.47
RNF40-203ENST00000493683 SLC36A1Q7Z2H8 476 aa18■□□□□ 0.47
RNF40-203ENST00000493683 TCTEX1D1Q8N7M0 179 aa18■□□□□ 0.47
RNF40-203ENST00000493683 DUSP18Q8NEJ0 188 aa18■□□□□ 0.47
RNF40-203ENST00000493683 PARD6AQ9NPB6 346 aa18■□□□□ 0.47
RNF40-203ENST00000493683 FBXO4Q9UKT5 387 aa18■□□□□ 0.47
RNF40-203ENST00000493683 GSTZ1O43708 216 aaPredicted RBP18■□□□□ 0.47
RNF40-203ENST00000493683 CRYABP02511 175 aaKnown RBP18■□□□□ 0.47
RNF40-203ENST00000493683 PET117Q6UWS5 81 aa18■□□□□ 0.47
RNF40-203ENST00000493683 HSD17B13Q7Z5P4 300 aaPredicted RBP18■□□□□ 0.47
RNF40-203ENST00000493683 OR8D4Q8NGM9 314 aa18■□□□□ 0.47
RNF40-203ENST00000493683 TBX21Q9UL17 535 aa18■□□□□ 0.47
RNF40-203ENST00000493683 LOC102723971A0A1B0GUV8 181 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 SLC6A1P30531 599 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 CD96P40200 585 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 ZNF117Q03924 483 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 ADAT1Q9BUB4 502 aaKnown RBP17.99■□□□□ 0.47
RNF40-203ENST00000493683 MYOZ1Q9NP98 299 aaPredicted RBP17.99■□□□□ 0.47
RNF40-203ENST00000493683 TMEM9BQ9NQ34 198 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 CCKARP32238 428 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 GALR1P47211 349 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 AMTP48728 403 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 MUC20Q8N307 709 aaPredicted RBP17.99■□□□□ 0.47
RNF40-203ENST00000493683 ALG1L2C9J202 215 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 COX19Q49B96 90 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 FFAR4Q5NUL3 377 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 NUFIP2Q7Z417 695 aaKnown RBP17.99■□□□□ 0.47
RNF40-203ENST00000493683 MSRB3Q8IXL7 192 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 MOB3AQ96BX8 217 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 ZFPL1O95159 310 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 INHBBP09529 407 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 PPP1CAP62136 330 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 PNRC1Q12796 327 aaPredicted RBP17.99■□□□□ 0.47
RNF40-203ENST00000493683 SIGIRRQ6IA17 410 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 NHLRC1Q6VVB1 395 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 OR5V1Q9UGF6 321 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 C3orf85A0A1B0GTC6 90 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 ANKRD20A5PA0PJZ0 165 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 SCO1O75880 301 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 CDAP32320 146 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 PPP1R1AQ13522 171 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 ARHGAP5-AS1Q96IT6 56 aa17.99■□□□□ 0.47
RNF40-203ENST00000493683 M0R1X1 148 aa17.98■□□□□ 0.47
RNF40-203ENST00000493683 MPC2O95563 127 aa17.98■□□□□ 0.47
RNF40-203ENST00000493683 USF1P22415 310 aaPredicted RBP17.98■□□□□ 0.47
RNF40-203ENST00000493683 SSX1Q16384 188 aa17.98■□□□□ 0.47
RNF40-203ENST00000493683 OR4F17Q8NGA8 305 aa17.98■□□□□ 0.47
RNF40-203ENST00000493683 ALKBH3Q96Q83 286 aaPredicted RBP17.98■□□□□ 0.47
RNF40-203ENST00000493683 RNF2Q99496 336 aa17.98■□□□□ 0.47
RNF40-203ENST00000493683 ZNF230Q9UIE0 474 aaPredicted RBP17.98■□□□□ 0.47
RNF40-203ENST00000493683 A0A1B0GUL6 1792 aa17.98■□□□□ 0.47
RNF40-203ENST00000493683 TMEM183BQ1AE95 376 aa17.98■□□□□ 0.47
RNF40-203ENST00000493683 ACY3Q96HD9 319 aa17.98■□□□□ 0.47
RNF40-203ENST00000493683 LRRC61Q9BV99 259 aa17.98■□□□□ 0.47
RNF40-203ENST00000493683 ZNF107Q9UII5 783 aaPredicted RBP17.98■□□□□ 0.47
RNF40-203ENST00000493683 ZNF141Q15928 474 aa17.98■□□□□ 0.47
RNF40-203ENST00000493683 LRFN3Q9BTN0 628 aa17.98■□□□□ 0.47
RNF40-203ENST00000493683 SLC6A13Q9NSD5 602 aa17.98■□□□□ 0.47
RNF40-203ENST00000493683 MAP1LC3B2A6NCE7 125 aa17.98■□□□□ 0.47
RNF40-203ENST00000493683 GNB2P62879 340 aa17.98■□□□□ 0.47
RNF40-203ENST00000493683 MAP1LC3BQ9GZQ8 125 aa17.98■□□□□ 0.47
RNF40-203ENST00000493683 PDCD6O75340 191 aa17.97■□□□□ 0.47
RNF40-203ENST00000493683 NGFP01138 241 aa17.97■□□□□ 0.47
RNF40-203ENST00000493683 MBPP02686 304 aaPredicted RBP17.97■□□□□ 0.47
RNF40-203ENST00000493683 PRDX4Q13162 271 aa17.97■□□□□ 0.47
RNF40-203ENST00000493683 ZNF275Q9NSD4 429 aaPredicted RBP17.97■□□□□ 0.47
RNF40-203ENST00000493683 H3BP45 60 aa17.97■□□□□ 0.47
RNF40-203ENST00000493683 SPCS3P61009 180 aa17.97■□□□□ 0.47
RNF40-203ENST00000493683 RHOBP62745 196 aa17.97■□□□□ 0.47
RNF40-203ENST00000493683 KHDC1LQ5JSQ8 128 aa17.97■□□□□ 0.47
RNF40-203ENST00000493683 BTNL3Q6UXE8 466 aa17.97■□□□□ 0.47
RNF40-203ENST00000493683 OR2A5Q96R48 311 aa17.97■□□□□ 0.47
RNF40-203ENST00000493683 EIF3IQ13347 325 aaKnown RBP17.97■□□□□ 0.47
RNF40-203ENST00000493683 IL11RAQ14626 422 aa17.97■□□□□ 0.47
RNF40-203ENST00000493683 CADM4Q8NFZ8 388 aa17.97■□□□□ 0.47
RNF40-203ENST00000493683 LOXHD1Q8IVV2 1947 aa17.97■□□□□ 0.47
RNF40-203ENST00000493683 ADAM20O43506 726 aa17.97■□□□□ 0.47
RNF40-203ENST00000493683 MLF1P58340 268 aa17.97■□□□□ 0.47
RNF40-203ENST00000493683 MYPOPQ86VE0 399 aaPredicted RBP17.97■□□□□ 0.47
RNF40-203ENST00000493683 TP53I13Q8NBR0 393 aaPredicted RBP17.97■□□□□ 0.47
RNF40-203ENST00000493683 OR2M7Q8NG81 312 aa17.97■□□□□ 0.47
RNF40-203ENST00000493683 OR10V1Q8NGI7 309 aa17.97■□□□□ 0.47
RNF40-203ENST00000493683 CDC14BO60729 498 aa17.96■□□□□ 0.47
RNF40-203ENST00000493683 PNPP00491 289 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms