RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 LMX1BO60663 402 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 CDC14BO60729 498 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 SS18L1O75177 396 aaPredicted RBP8.7□□□□□ -1.02
PRPF3-206ENST00000493553 CRTAPO75718 401 aaPredicted RBP8.7□□□□□ -1.02
PRPF3-206ENST00000493553 MPIG6BO95866 241 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 CSTBP04080 98 aaKnown RBP8.7□□□□□ -1.02
PRPF3-206ENST00000493553 DBHP09172 617 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 SULT1A3P0DMM9 295 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 SULT1A4P0DMN0 295 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 TMIGD3P0DMS9 266 aaPredicted RBP8.7□□□□□ -1.02
PRPF3-206ENST00000493553 HIST1H1DP16402 221 aaKnown RBP8.7□□□□□ -1.02
PRPF3-206ENST00000493553 FAHP16930 419 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 PTGER4P35408 488 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 RFC3P40938 356 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 PMELP40967 661 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 MTCP1P56278 107 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 TAS2R31P59538 309 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 TAS2R46P59540 309 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 UBE2MP61081 183 aaKnown RBP8.7□□□□□ -1.02
PRPF3-206ENST00000493553 CD83Q01151 205 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 TGIF1Q15583 401 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 OR8B8Q15620 311 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 MPPED2Q15777 294 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 TMEM42Q69YG0 159 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 FAHD2BQ6P2I3 314 aaPredicted RBP8.7□□□□□ -1.02
PRPF3-206ENST00000493553 ASCL4Q6XD76 172 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 VASH2Q86V25 355 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 C1orf174Q8IYL3 243 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 ARRDC1Q8N5I2 433 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 ZDHHC22Q8N966 263 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 PXT1Q8NFP0 134 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 GRPEL2Q8TAA5 225 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 TNFAIP8L1Q8WVP5 186 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 SNAPC3Q92966 411 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 BORCS8Q96FH0 119 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 FAHD2AQ96GK7 314 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 LYZL4Q96KX0 146 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 GINS4Q9BRT9 223 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 TM2D1Q9BX74 207 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 LPAR5Q9H1C0 372 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 DEFB127Q9H1M4 99 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 TP63Q9H3D4 680 aaPredicted RBP8.7□□□□□ -1.02
PRPF3-206ENST00000493553 SLA2Q9H6Q3 261 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 RANGRFQ9HD47 186 aaPredicted RBP8.7□□□□□ -1.02
PRPF3-206ENST00000493553 NKIRAS2Q9NYR9 191 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 IL36GQ9NZH8 169 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 ZNF224Q9NZL3 707 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 ZNF319Q9P2F9 582 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 EDARQ9UNE0 448 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 EML6Q6ZMW3 1958 aa8.7□□□□□ -1.02
PRPF3-206ENST00000493553 FAM90A10PA6NDY2 464 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 FAM90A18PA6NE21 464 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 FAM90A16PA6NEW6 464 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 FAM90A20PA6NIJ5 464 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 FAM90A8PA6NJQ4 464 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 FAM90A7PA6NKC0 464 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 FAM90A22PA8MWA6 464 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 FAM90A12PA8MX19 464 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 FAM90A5PA8MXJ8 464 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 FAM90A23PA8MXZ1 464 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 ARPC1BO15143 372 aaKnown RBP8.69□□□□□ -1.02
PRPF3-206ENST00000493553 GMDSO60547 372 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 NRASP01111 189 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 CRYABP02511 175 aaKnown RBP8.69□□□□□ -1.02
PRPF3-206ENST00000493553 CD3DP04234 171 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 CRHP06850 196 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 HOXD4P09016 255 aaPredicted RBP8.69□□□□□ -1.02
PRPF3-206ENST00000493553 GIPP09681 153 aaPredicted RBP8.69□□□□□ -1.02
PRPF3-206ENST00000493553 FAM90A15PP0C7V4 464 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 FAM90A13PP0C7W8 464 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 FAM90A14PP0C7W9 464 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 FAM90A24PP0C7X0 464 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 NAT1P18440 290 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 PI3P19957 117 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 AGTR1P30556 359 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 APLNRP35414 380 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 ECI1P42126 302 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 VEGFCP49767 419 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 RAP2BP61225 183 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 CD300CQ08708 224 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 FAPQ12884 760 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 UNC119Q13432 240 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 TNK1Q13470 666 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 RSU1Q15404 277 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 LINC00303Q3SY05 128 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 LPCAT3Q6P1A2 487 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 MTFR2Q6P444 385 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 C11orf88Q6PI97 169 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 PLXDC2Q6UX71 529 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 TRAPPC6BQ86SZ2 158 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 SAXO1Q8IYX7 474 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 PAQR4Q8N4S7 273 aaPredicted RBP8.69□□□□□ -1.02
PRPF3-206ENST00000493553 ACBD4Q8NC06 268 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 C1orf162Q8NEQ5 155 aaPredicted RBP8.69□□□□□ -1.02
PRPF3-206ENST00000493553 OR51T1Q8NGJ9 327 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 ZFAND1Q8TCF1 268 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 BOD1Q96IK1 185 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 HIST1H2AAQ96QV6 131 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 GAL3ST1Q99999 423 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 SELENOIQ9C0D9 397 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms