RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 MRPL21Q7Z2W9 205 aaKnown RBP5.66□□□□□ -1.5
VPS52-219ENST00000493379 C11orf53Q8IXP5 236 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 OR10H4Q8NGA5 316 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 OR14K1Q8NGZ2 314 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 OR2G2Q8NGZ5 317 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 OR52N1Q8NH53 320 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 OR2AE1Q8NHA4 323 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 ELMOD3Q96FG2 381 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 MRPL48Q96GC5 212 aaKnown RBP5.66□□□□□ -1.5
VPS52-219ENST00000493379 PGAM5Q96HS1 289 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 CDCA4Q9BXL8 241 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 EGLN1Q9GZT9 426 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 TPK1Q9H3S4 243 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 SAP30LQ9HAJ7 183 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 AMBNQ9NP70 447 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 YAE1D1Q9NRH1 226 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 ZNF275Q9NSD4 429 aaPredicted RBP5.66□□□□□ -1.5
VPS52-219ENST00000493379 OR52A1Q9UKL2 312 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 RAB26Q9ULW5 256 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 SLC22A13Q9Y226 551 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 CAB39Q9Y376 341 aaPredicted RBP5.66□□□□□ -1.5
VPS52-219ENST00000493379 RRP15Q9Y3B9 282 aaKnown RBP5.66□□□□□ -1.5
VPS52-219ENST00000493379 GGT3PA6NGU5 568 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 OR4C45A6NMZ5 311 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 LOC110117498-PIK3R3F6TDL0 507 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 TMEM178BH3BS89 294 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 PSMD9O00233 223 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 SPRY3O43610 288 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 MTRF1O75570 445 aaKnown RBP5.65□□□□□ -1.5
VPS52-219ENST00000493379 DHRS3O75911 302 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 PLA2G1BP04054 148 aaKnown RBP5.65□□□□□ -1.5
VPS52-219ENST00000493379 ANXA2P07355 339 aaKnown RBP5.65□□□□□ -1.5
VPS52-219ENST00000493379 FAM157CP0CG43 387 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 ZNF12P17014 697 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 USF1P22415 310 aaPredicted RBP5.65□□□□□ -1.5
VPS52-219ENST00000493379 TNFSF4P23510 183 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 VHLP40337 213 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 KIR3DL2P43630 455 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 SRP9P49458 86 aaKnown RBP5.65□□□□□ -1.5
VPS52-219ENST00000493379 ETV1P50549 477 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 NANOS3P60323 173 aaKnown RBP5.65□□□□□ -1.5
VPS52-219ENST00000493379 LMO4P61968 165 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 SLC35A2P78381 396 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 TNFAIP6P98066 277 aaPredicted RBP5.65□□□□□ -1.5
VPS52-219ENST00000493379 SLC3A1Q07837 685 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 MZT1Q08AG7 82 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 RIPPLY1Q0D2K3 151 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 ST3GAL4Q11206 333 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 IRF3Q14653 427 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 TIGD6Q17RP2 521 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 CEACAM21Q3KPI0 293 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 TMEM155Q4W5P6 130 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 WDR38Q5JTN6 314 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 C6orf52Q5T4I8 152 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 TMEM244Q5VVB8 128 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 DOK3Q7L591 496 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 LHFPL3Q86UP9 236 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 LRRC28Q86X40 367 aaPredicted RBP5.65□□□□□ -1.5
VPS52-219ENST00000493379 PRSS35Q8N3Z0 413 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 FTMTQ8N4E7 242 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 YIPF7Q8N8F6 280 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 SEMA6DQ8NFY4 1073 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 OR2Z1Q8NG97 314 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 OR56B2PQ8NGI1 322 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 OR5A2Q8NGI9 324 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 SGMS2Q8NHU3 365 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 OR51E1Q8TCB6 317 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 SPRYD4Q8WW59 207 aaPredicted RBP5.65□□□□□ -1.5
VPS52-219ENST00000493379 ITLN1Q8WWA0 313 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 OR5P3Q8WZ94 311 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 TMEM80Q96HE8 168 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 OR2V2Q96R30 315 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 ALG8Q9BVK2 526 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 YTHDF1Q9BYJ9 559 aaKnown RBP5.65□□□□□ -1.5
VPS52-219ENST00000493379 BPESC1Q9GZL8 116 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 ISG20L2Q9H9L3 353 aaKnown RBP5.65□□□□□ -1.5
VPS52-219ENST00000493379 GPR84Q9NQS5 396 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 DECR2Q9NUI1 292 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 TMEM106BQ9NUM4 274 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 BABAM2Q9NXR7 383 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 IKZF2Q9UKS7 526 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 EXOSC1Q9Y3B2 195 aaKnown RBP5.65□□□□□ -1.5
VPS52-219ENST00000493379 RHBDD3Q9Y3P4 386 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 PCDHGB5Q9Y5G0 923 aa5.65□□□□□ -1.5
VPS52-219ENST00000493379 IGHV4-61A0A0C4DH41 118 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 ZNF816-ZNF321PA0A0X1KG74 233 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 TMEM210A6NLX4 147 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 ANKRD30BLA7E2S9 258 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 F5H5P2 479 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 LYNX1G3V0Z9 82 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 MRPS14O60783 128 aaKnown RBP5.64□□□□□ -1.51
VPS52-219ENST00000493379 NOS1APO75052 506 aaPredicted RBP5.64□□□□□ -1.51
VPS52-219ENST00000493379 IGHV2-70P01814 119 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 MT-ND2P03891 347 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 HLA-DPB1P04440 258 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 LYNX1P0DP58 116 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 CA6P23280 308 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 CRHBPP24387 322 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 C21orf33P30042 268 aaPredicted RBP5.64□□□□□ -1.51
VPS52-219ENST00000493379 BDH1Q02338 343 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms