RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 GNB3P16520 340 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 FAHP16930 419 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 CPT2P23786 658 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 HTR5AP47898 357 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 MEOX1P50221 254 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 TAS2R31P59538 309 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 PPIAP62937 165 aaKnown RBP9.33□□□□□ -0.92
USP4-214ENST00000491791 FAM3AP98173 230 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 TEX261Q6UWH6 196 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.33□□□□□ -0.92
USP4-214ENST00000491791 GALNTL5Q7Z4T8 443 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 C1QL2Q7Z5L3 287 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 PEG10Q86TG7 708 aaKnown RBP9.33□□□□□ -0.92
USP4-214ENST00000491791 LHFPL1Q86WI0 220 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 SLC7A5P1Q8MH63 180 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 C12orf45Q8N5I9 185 aaPredicted RBP9.33□□□□□ -0.92
USP4-214ENST00000491791 IL22RA1Q8N6P7 574 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 ZSCAN4Q8NAM6 433 aaPredicted RBP9.33□□□□□ -0.92
USP4-214ENST00000491791 TMEM178AQ8NBL3 297 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 TMEM185AQ8NFB2 350 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 OR8S1Q8NH09 359 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 TERB2Q8NHR7 220 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 SNAPC3Q92966 411 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 DACT3Q96B18 629 aaPredicted RBP9.33□□□□□ -0.92
USP4-214ENST00000491791 ZNF775Q96BV0 537 aaPredicted RBP9.33□□□□□ -0.92
USP4-214ENST00000491791 CMBLQ96DG6 245 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 BOD1Q96IK1 185 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 Q96M66 194 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 SCGB3A2Q96PL1 93 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 ALKBH3Q96Q83 286 aaPredicted RBP9.33□□□□□ -0.92
USP4-214ENST00000491791 GPER1Q99527 375 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 HES7Q9BYE0 225 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 CHST6Q9GZX3 395 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 POFUT1Q9H488 388 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 OPA3Q9H6K4 179 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 PCDHB16Q9NRJ7 776 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 SLC7A10Q9NS82 523 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 PLA2G3Q9NZ20 509 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 U3KQ87 197 aa9.33□□□□□ -0.92
USP4-214ENST00000491791 MED12Q93074 2177 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 ZNF587BE7ETH6 402 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 F5H5P2 479 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 CRTAPO75718 401 aaPredicted RBP9.32□□□□□ -0.92
USP4-214ENST00000491791 IGHG3P01860 377 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 LCATP04180 440 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 SERPINA5P05154 406 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 FCER2P06734 321 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 FCGR2AP12318 317 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 ARR3P36575 388 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 ECI1P42126 302 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 RBP2P50120 134 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 FUT6P51993 359 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 H2BFSP57053 126 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 ARF1P84077 181 aaKnown RBP9.32□□□□□ -0.92
USP4-214ENST00000491791 DHRS2Q13268 280 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 SURF2Q15527 256 aaPredicted RBP9.32□□□□□ -0.92
USP4-214ENST00000491791 LY6G6FQ5SQ64 297 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 TMEM65Q6PI78 240 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 PLXDC2Q6UX71 529 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 LINC00696Q6ZRV3 163 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 OR4S1Q8NGB4 309 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 OR4K15Q8NH41 348 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 FGFBP3Q8TAT2 258 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 MITD1Q8WV92 249 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 NUDCD2Q8WVJ2 157 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 TNFAIP8L1Q8WVP5 186 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 FBXW5Q969U6 566 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 WDYHV1Q96HA8 205 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 ARHGAP5-AS1Q96IT6 56 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 SPACA5Q96QH8 159 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 DHRS9Q9BPW9 319 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 PECRQ9BY49 303 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 METTL9Q9H1A3 318 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 SLC6A15Q9H2J7 730 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 ZNF552Q9H707 407 aaPredicted RBP9.32□□□□□ -0.92
USP4-214ENST00000491791 ZMAT3Q9HA38 289 aaKnown RBP9.32□□□□□ -0.92
USP4-214ENST00000491791 IFT46Q9NQC8 304 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 GLRX2Q9NS18 164 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 DECR2Q9NUI1 292 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 MYEF2Q9P2K5 600 aaKnown RBP9.32□□□□□ -0.92
USP4-214ENST00000491791 SLC23A1Q9UHI7 598 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 VSIG4Q9Y279 399 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 SSUH2Q9Y2M2 353 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 AUP1Q9Y679 476 aa9.32□□□□□ -0.92
USP4-214ENST00000491791 NAV2Q8IVL1 2488 aa9.31□□□□□ -0.92
USP4-214ENST00000491791 ZNF816-ZNF321PA0A0X1KG74 233 aa9.31□□□□□ -0.92
USP4-214ENST00000491791 FAM90A10PA6NDY2 464 aa9.31□□□□□ -0.92
USP4-214ENST00000491791 FAM90A18PA6NE21 464 aa9.31□□□□□ -0.92
USP4-214ENST00000491791 FAM90A16PA6NEW6 464 aa9.31□□□□□ -0.92
USP4-214ENST00000491791 FAM90A20PA6NIJ5 464 aa9.31□□□□□ -0.92
USP4-214ENST00000491791 FAM90A8PA6NJQ4 464 aa9.31□□□□□ -0.92
USP4-214ENST00000491791 FAM90A7PA6NKC0 464 aa9.31□□□□□ -0.92
USP4-214ENST00000491791 DBX1A6NMT0 343 aa9.31□□□□□ -0.92
USP4-214ENST00000491791 OR2AT4A6NND4 320 aa9.31□□□□□ -0.92
USP4-214ENST00000491791 FAM90A22PA8MWA6 464 aa9.31□□□□□ -0.92
USP4-214ENST00000491791 FAM90A12PA8MX19 464 aa9.31□□□□□ -0.92
USP4-214ENST00000491791 FAM90A5PA8MXJ8 464 aa9.31□□□□□ -0.92
USP4-214ENST00000491791 FAM90A23PA8MXZ1 464 aa9.31□□□□□ -0.92
USP4-214ENST00000491791 MCRIP1C9JLW8 97 aa9.31□□□□□ -0.92
USP4-214ENST00000491791 J3QW42 95 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms