RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 KCNS2Q9ULS6 477 aa14.46□□□□□ -0.09
VIM-205ENST00000485947 ANKRD61A6NGH8 418 aa14.45□□□□□ -0.1
VIM-205ENST00000485947 C17orf100A8MU93 164 aa14.45□□□□□ -0.1
VIM-205ENST00000485947 NGFP01138 241 aa14.45□□□□□ -0.1
VIM-205ENST00000485947 CLEC2LP0C7M8 214 aa14.45□□□□□ -0.1
VIM-205ENST00000485947 GCH1P30793 250 aa14.45□□□□□ -0.1
VIM-205ENST00000485947 GNALP38405 381 aa14.45□□□□□ -0.1
VIM-205ENST00000485947 ALDH3B1P43353 468 aa14.45□□□□□ -0.1
VIM-205ENST00000485947 GSK3AP49840 483 aa14.45□□□□□ -0.1
VIM-205ENST00000485947 PPP1CBP62140 327 aa14.45□□□□□ -0.1
VIM-205ENST00000485947 RIPPLY1Q0D2K3 151 aa14.45□□□□□ -0.1
VIM-205ENST00000485947 HNRNPA0Q13151 305 aaKnown RBP14.45□□□□□ -0.1
VIM-205ENST00000485947 GK2Q14410 553 aaPredicted RBP14.45□□□□□ -0.1
VIM-205ENST00000485947 MBNL2Q5VZF2 373 aaKnown RBP14.45□□□□□ -0.1
VIM-205ENST00000485947 FBXW12Q6X9E4 464 aa14.45□□□□□ -0.1
VIM-205ENST00000485947 UTS2BQ765I0 119 aa14.45□□□□□ -0.1
VIM-205ENST00000485947 LRRTM1Q86UE6 522 aa14.45□□□□□ -0.1
VIM-205ENST00000485947 LRP11Q86VZ4 500 aa14.45□□□□□ -0.1
VIM-205ENST00000485947 NKAIN3Q8N8D7 197 aa14.45□□□□□ -0.1
VIM-205ENST00000485947 OR1J1Q8NGS3 322 aa14.45□□□□□ -0.1
VIM-205ENST00000485947 AP3S1Q92572 193 aa14.45□□□□□ -0.1
VIM-205ENST00000485947 C1orf159Q96HA4 380 aa14.45□□□□□ -0.1
VIM-205ENST00000485947 SLIRPQ9GZT3 109 aaKnown RBP14.45□□□□□ -0.1
VIM-205ENST00000485947 TPK1Q9H3S4 243 aa14.45□□□□□ -0.1
VIM-205ENST00000485947 ZCCHC4Q9H5U6 513 aa14.45□□□□□ -0.1
VIM-205ENST00000485947 TAS2R4Q9NYW5 299 aa14.45□□□□□ -0.1
VIM-205ENST00000485947 PTTG3PQ9NZH4 202 aa14.45□□□□□ -0.1
VIM-205ENST00000485947 MXRA5Q9NR99 2828 aa14.45□□□□□ -0.1
VIM-205ENST00000485947 TRAV8-7A0A075B6U6 113 aa14.44□□□□□ -0.1
VIM-205ENST00000485947 LOC100289279A0A1B0GTE1 492 aa14.44□□□□□ -0.1
VIM-205ENST00000485947 NOTOA8MTQ0 251 aa14.44□□□□□ -0.1
VIM-205ENST00000485947 LILRA1O75019 489 aa14.44□□□□□ -0.1
VIM-205ENST00000485947 ALX3O95076 343 aa14.44□□□□□ -0.1
VIM-205ENST00000485947 RAB3AP20336 220 aa14.44□□□□□ -0.1
VIM-205ENST00000485947 ZNF404Q494X3 552 aa14.44□□□□□ -0.1
VIM-205ENST00000485947 ASPHD2Q6ICH7 369 aa14.44□□□□□ -0.1
VIM-205ENST00000485947 ZNF529Q6P280 563 aa14.44□□□□□ -0.1
VIM-205ENST00000485947 KRT74Q7RTS7 529 aa14.44□□□□□ -0.1
VIM-205ENST00000485947 CSNK2A3Q8NEV1 391 aa14.44□□□□□ -0.1
VIM-205ENST00000485947 ORAI1Q96D31 301 aa14.44□□□□□ -0.1
VIM-205ENST00000485947 MSI2Q96DH6 328 aaKnown RBP14.44□□□□□ -0.1
VIM-205ENST00000485947 BEX2Q9BXY8 128 aa14.44□□□□□ -0.1
VIM-205ENST00000485947 CHST5Q9GZS9 411 aa14.44□□□□□ -0.1
VIM-205ENST00000485947 NXF2Q9GZY0 626 aaKnown RBP14.44□□□□□ -0.1
VIM-205ENST00000485947 SHARPINQ9H0F6 387 aa14.44□□□□□ -0.1
VIM-205ENST00000485947 MMP27Q9H306 513 aa14.44□□□□□ -0.1
VIM-205ENST00000485947 NEK6Q9HC98 313 aa14.44□□□□□ -0.1
VIM-205ENST00000485947 MYEF2Q9P2K5 600 aaKnown RBP14.44□□□□□ -0.1
VIM-205ENST00000485947 PIGLQ9Y2B2 252 aa14.44□□□□□ -0.1
VIM-205ENST00000485947 V9GY05 133 aa14.44□□□□□ -0.1
VIM-205ENST00000485947 A0A075B6Q4 140 aa14.43□□□□□ -0.1
VIM-205ENST00000485947 A0A0G2JK05 382 aa14.43□□□□□ -0.1
VIM-205ENST00000485947 ANXA2P2A6NMY6 339 aa14.43□□□□□ -0.1
VIM-205ENST00000485947 SULT1B1O43704 296 aa14.43□□□□□ -0.1
VIM-205ENST00000485947 CLPXO76031 633 aa14.43□□□□□ -0.1
VIM-205ENST00000485947 ADH4P08319 380 aa14.43□□□□□ -0.1
VIM-205ENST00000485947 SELEP16581 610 aa14.43□□□□□ -0.1
VIM-205ENST00000485947 HNF1AP20823 631 aa14.43□□□□□ -0.1
VIM-205ENST00000485947 RANBP1P43487 201 aa14.43□□□□□ -0.1
VIM-205ENST00000485947 DYNC1I2Q13409 638 aaKnown RBP14.43□□□□□ -0.1
VIM-205ENST00000485947 CEP78Q5JTW2 689 aa14.43□□□□□ -0.1
VIM-205ENST00000485947 SFXN4Q6P4A7 337 aa14.43□□□□□ -0.1
VIM-205ENST00000485947 LINC00299Q6ZSB3 139 aa14.43□□□□□ -0.1
VIM-205ENST00000485947 FTMTQ8N4E7 242 aa14.43□□□□□ -0.1
VIM-205ENST00000485947 OR1M1Q8NGA1 313 aa14.43□□□□□ -0.1
VIM-205ENST00000485947 FOXRED1Q96CU9 486 aaPredicted RBP14.43□□□□□ -0.1
VIM-205ENST00000485947 KCTD12Q96CX2 325 aaKnown RBP14.43□□□□□ -0.1
VIM-205ENST00000485947 MARS2Q96GW9 593 aaKnown RBP14.43□□□□□ -0.1
VIM-205ENST00000485947 TECTBQ96PL2 329 aa14.43□□□□□ -0.1
VIM-205ENST00000485947 DIRC2Q96SL1 478 aa14.43□□□□□ -0.1
VIM-205ENST00000485947 BARHL1Q9BZE3 327 aa14.43□□□□□ -0.1
VIM-205ENST00000485947 FZR1Q9UM11 496 aa14.43□□□□□ -0.1
VIM-205ENST00000485947 YLPM1P49750 1951 aaKnown RBP14.43□□□□□ -0.1
VIM-205ENST00000485947 ZNF816-ZNF321PA0A0X1KG74 233 aa14.42□□□□□ -0.1
VIM-205ENST00000485947 PLSCR5A0PG75 271 aa14.42□□□□□ -0.1
VIM-205ENST00000485947 GGT3PA6NGU5 568 aa14.42□□□□□ -0.1
VIM-205ENST00000485947 HPXP02790 462 aa14.42□□□□□ -0.1
VIM-205ENST00000485947 MAS1P04201 325 aa14.42□□□□□ -0.1
VIM-205ENST00000485947 ALDOBP05062 364 aa14.42□□□□□ -0.1
VIM-205ENST00000485947 NAT2P11245 290 aa14.42□□□□□ -0.1
VIM-205ENST00000485947 RAC2P15153 192 aa14.42□□□□□ -0.1
VIM-205ENST00000485947 FAHP16930 419 aa14.42□□□□□ -0.1
VIM-205ENST00000485947 ZNF16P17020 682 aaPredicted RBP14.42□□□□□ -0.1
VIM-205ENST00000485947 ACKR3P25106 362 aa14.42□□□□□ -0.1
VIM-205ENST00000485947 CFPP27918 469 aa14.42□□□□□ -0.1
VIM-205ENST00000485947 BDKRB2P30411 391 aa14.42□□□□□ -0.1
VIM-205ENST00000485947 GPR6P46095 362 aaPredicted RBP14.42□□□□□ -0.1
VIM-205ENST00000485947 CLVS2Q5SYC1 327 aa14.42□□□□□ -0.1
VIM-205ENST00000485947 GLT8D1Q68CQ7 371 aa14.42□□□□□ -0.1
VIM-205ENST00000485947 CDH26Q8IXH8 852 aa14.42□□□□□ -0.1
VIM-205ENST00000485947 LINC01356Q8N9X3 169 aa14.42□□□□□ -0.1
VIM-205ENST00000485947 OR13C9Q8NGT0 318 aa14.42□□□□□ -0.1
VIM-205ENST00000485947 MCFD2Q8NI22 146 aa14.42□□□□□ -0.1
VIM-205ENST00000485947 KLF14Q8TD94 323 aaPredicted RBP14.42□□□□□ -0.1
VIM-205ENST00000485947 ACOT12Q8WYK0 555 aa14.42□□□□□ -0.1
VIM-205ENST00000485947 MRI1Q9BV20 369 aa14.42□□□□□ -0.1
VIM-205ENST00000485947 POFUT1Q9H488 388 aa14.42□□□□□ -0.1
VIM-205ENST00000485947 TMEM138Q9NPI0 162 aa14.42□□□□□ -0.1
VIM-205ENST00000485947 ZDHHC8Q9ULC8 765 aa14.42□□□□□ -0.1
VIM-205ENST00000485947 AK6Q9Y3D8 172 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms