RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 SLC34A2O95436 690 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 CSTBP04080 98 aaKnown RBP9.48□□□□□ -0.89
VTI1A-204ENST00000480057 CD74P04233 296 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 FAM87AP0C7U9 286 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 FAM90A15PP0C7V4 464 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 FAM90A13PP0C7W8 464 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 FAM90A14PP0C7W9 464 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 FAM90A24PP0C7X0 464 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 SFTPCP11686 197 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 ZNF35P13682 527 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 GTF2F2P13984 249 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 GIFP27352 417 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 RAD52P43351 418 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 VEGFCP49767 419 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 UCP2P55851 309 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 GUCA2AQ02747 115 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 GTF3C1Q12789 2109 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 KLRB1Q12918 225 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 PDZK1IP1Q13113 114 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 ZMYND11Q15326 602 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 RSU1Q15404 277 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 PCGF3Q3KNV8 242 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 MTFR2Q6P444 385 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 ZNF474Q6S9Z5 364 aaPredicted RBP9.48□□□□□ -0.89
VTI1A-204ENST00000480057 C1QL2Q7Z5L3 287 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 MRGPRGQ86SM5 289 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 AKAP14Q86UN6 197 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 OR51T1Q8NGJ9 327 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 OR56B4Q8NH76 319 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 Q96M66 194 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 GAL3ST1Q99999 423 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 SELENOIQ9C0D9 397 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 RHOFQ9HBH0 211 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 ELOVL5Q9NYP7 299 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 MYEF2Q9P2K5 600 aaKnown RBP9.48□□□□□ -0.89
VTI1A-204ENST00000480057 HSF4Q9ULV5 492 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 SLC25A15Q9Y619 301 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 A0A0A6YYD4 124 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 C7orf66A4D0T2 115 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 TMEM8BA6NDV4 472 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 A8MXE2 369 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 IQCF6A8MYZ5 107 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 H3BUI4 141 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 PRAF2O60831 178 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 CYB5AP00167 134 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 MT-ND4P03905 459 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 HNRNPCP07910 306 aaKnown RBP eCLIP9.47□□□□□ -0.89
VTI1A-204ENST00000480057 CELA3BP08861 270 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 PTHLHP12272 177 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 NAT1P18440 290 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 MPZP25189 248 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 PMELP40967 661 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 MECP2P51608 486 aaKnown RBP9.47□□□□□ -0.89
VTI1A-204ENST00000480057 MEF2DQ14814 521 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 TATDN3Q17R31 274 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 ACTBL2Q562R1 376 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 ELP2Q6IA86 826 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 TMEM211Q6ICI0 200 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 STEAP1BQ6NZ63 245 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 FJX1Q86VR8 437 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 OR5D18Q8NGL1 313 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 OR5P3Q8WZ94 311 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 BCL2L14Q9BZR8 327 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 POFUT1Q9H488 388 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 BANF2Q9H503 90 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 GPR160Q9UJ42 338 aa9.47□□□□□ -0.89
VTI1A-204ENST00000480057 TMEM235A6NFC5 223 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 ZNF736B4DX44 427 aaPredicted RBP9.46□□□□□ -0.9
VTI1A-204ENST00000480057 SOCS1O15524 211 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 NDUFB6O95139 128 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 H2AFB2P0C5Z0 115 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 CECR9P0C854 216 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 SERPINA2P20848 420 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 TMEM50BP56557 158 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 GNG2P59768 71 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 GNG3P63215 75 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 HLXQ14774 488 aaPredicted RBP9.46□□□□□ -0.9
VTI1A-204ENST00000480057 TSC22D1Q15714 1073 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 NHLRC3Q5JS37 347 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 PLAC9Q5JTB6 97 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 UNQ6494/PRO21346Q6UXR6 183 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 TRAPPC6BQ86SZ2 158 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 MYPOPQ86VE0 399 aaPredicted RBP9.46□□□□□ -0.9
VTI1A-204ENST00000480057 GLCCI1Q86VQ1 547 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 ZNF573Q86YE8 665 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 MKXQ8IYA7 352 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 OSR2Q8N2R0 312 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 RPRMLQ8N4K4 120 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 OR4C16Q8NGL9 310 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 HPSE2Q8WWQ2 592 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 ST8SIA4Q92187 359 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 OCSTAMPQ9BR26 566 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 NICN1Q9BSH3 213 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 PKIBQ9C010 78 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 ELL3Q9HB65 397 aaPredicted RBP9.46□□□□□ -0.9
VTI1A-204ENST00000480057 NUDT15Q9NV35 164 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 ASF1BQ9NVP2 202 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 SLC2A8Q9NY64 477 aa9.46□□□□□ -0.9
VTI1A-204ENST00000480057 A0A0B4J293 547 aa9.45□□□□□ -0.9
VTI1A-204ENST00000480057 IGHV1-18A0A0C4DH31 117 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms