RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 ACTA2P62736 377 aa12.05□□□□□ -0.48
SMG5-204ENST00000476954 ACTG2P63267 376 aa12.05□□□□□ -0.48
SMG5-204ENST00000476954 ACTC1P68032 377 aa12.05□□□□□ -0.48
SMG5-204ENST00000476954 ACTA1P68133 377 aa12.05□□□□□ -0.48
SMG5-204ENST00000476954 GFOD2Q3B7J2 385 aa12.05□□□□□ -0.48
SMG5-204ENST00000476954 LRRC23Q53EV4 343 aaPredicted RBP12.05□□□□□ -0.48
SMG5-204ENST00000476954 MINOS1Q5TGZ0 78 aa12.05□□□□□ -0.48
SMG5-204ENST00000476954 LCN8Q6JVE9 175 aa12.05□□□□□ -0.48
SMG5-204ENST00000476954 PLBD1Q6P4A8 553 aa12.05□□□□□ -0.48
SMG5-204ENST00000476954 ZBTB46Q86UZ6 589 aa12.05□□□□□ -0.48
SMG5-204ENST00000476954 ZDHHC21Q8IVQ6 265 aa12.05□□□□□ -0.48
SMG5-204ENST00000476954 OR4Q3Q8NH05 313 aa12.05□□□□□ -0.48
SMG5-204ENST00000476954 DDB2Q92466 427 aa12.05□□□□□ -0.48
SMG5-204ENST00000476954 RNF170Q96K19 258 aa12.05□□□□□ -0.48
SMG5-204ENST00000476954 ZNF488Q96MN9 340 aa12.05□□□□□ -0.48
SMG5-204ENST00000476954 ERMAPQ96PL5 475 aaPredicted RBP12.05□□□□□ -0.48
SMG5-204ENST00000476954 KCNJ15Q99712 375 aa12.05□□□□□ -0.48
SMG5-204ENST00000476954 NDEL1Q9GZM8 345 aa12.05□□□□□ -0.48
SMG5-204ENST00000476954 C1orf21Q9H246 121 aa12.05□□□□□ -0.48
SMG5-204ENST00000476954 CENPMQ9NSP4 180 aa12.05□□□□□ -0.48
SMG5-204ENST00000476954 MINOS1-NBL1R4GNA1 71 aa12.05□□□□□ -0.48
SMG5-204ENST00000476954 OR6C68A6NDL8 312 aa12.04□□□□□ -0.48
SMG5-204ENST00000476954 TRIM64CA6NLI5 447 aa12.04□□□□□ -0.48
SMG5-204ENST00000476954 H3BUI4 141 aa12.04□□□□□ -0.48
SMG5-204ENST00000476954 SLC22A2O15244 555 aa12.04□□□□□ -0.48
SMG5-204ENST00000476954 RGS16O15492 202 aaPredicted RBP12.04□□□□□ -0.48
SMG5-204ENST00000476954 MYF6P23409 242 aa12.04□□□□□ -0.48
SMG5-204ENST00000476954 PYCR1P32322 319 aa12.04□□□□□ -0.48
SMG5-204ENST00000476954 IDH3AP50213 366 aa12.04□□□□□ -0.48
SMG5-204ENST00000476954 RPS6KA3P51812 740 aa12.04□□□□□ -0.48
SMG5-204ENST00000476954 FAM76BQ5HYJ3 339 aa12.04□□□□□ -0.48
SMG5-204ENST00000476954 DPY19L2P2Q6ZN68 376 aa12.04□□□□□ -0.48
SMG5-204ENST00000476954 DCXRQ7Z4W1 244 aa12.04□□□□□ -0.48
SMG5-204ENST00000476954 ZNRF4Q8WWF5 429 aa12.04□□□□□ -0.48
SMG5-204ENST00000476954 STMN2Q93045 179 aa12.04□□□□□ -0.48
SMG5-204ENST00000476954 RSRC1Q96IZ7 334 aaKnown RBP12.04□□□□□ -0.48
SMG5-204ENST00000476954 TMEM109Q9BVC6 243 aa12.04□□□□□ -0.48
SMG5-204ENST00000476954 DCLRE1BQ9H816 532 aa12.04□□□□□ -0.48
SMG5-204ENST00000476954 PRR23D1E9PI22 279 aaPredicted RBP12.03□□□□□ -0.48
SMG5-204ENST00000476954 RENP00797 406 aa12.03□□□□□ -0.48
SMG5-204ENST00000476954 RPLP1P05386 114 aaKnown RBP12.03□□□□□ -0.48
SMG5-204ENST00000476954 ANXA2P07355 339 aaKnown RBP12.03□□□□□ -0.48
SMG5-204ENST00000476954 ZNF728P0DKX0 622 aa12.03□□□□□ -0.48
SMG5-204ENST00000476954 PRR23D2P0DMB1 279 aaPredicted RBP12.03□□□□□ -0.48
SMG5-204ENST00000476954 HIST1H1CP16403 213 aaKnown RBP12.03□□□□□ -0.48
SMG5-204ENST00000476954 ACKR3P25106 362 aa12.03□□□□□ -0.48
SMG5-204ENST00000476954 PRDX2P32119 198 aa12.03□□□□□ -0.48
SMG5-204ENST00000476954 IFNA8P32881 189 aa12.03□□□□□ -0.48
SMG5-204ENST00000476954 GPM6AP51674 278 aa12.03□□□□□ -0.48
SMG5-204ENST00000476954 TAF13Q15543 124 aa12.03□□□□□ -0.48
SMG5-204ENST00000476954 FAM57BQ71RH2 274 aa12.03□□□□□ -0.48
SMG5-204ENST00000476954 TCF23Q7RTU1 214 aa12.03□□□□□ -0.48
SMG5-204ENST00000476954 VTCN1Q7Z7D3 282 aa12.03□□□□□ -0.48
SMG5-204ENST00000476954 CALHM1Q8IU99 346 aa12.03□□□□□ -0.48
SMG5-204ENST00000476954 SLAMF6Q96DU3 332 aa12.03□□□□□ -0.48
SMG5-204ENST00000476954 MPC1Q9Y5U8 109 aa12.03□□□□□ -0.48
SMG5-204ENST00000476954 ABCA13Q86UQ4 5058 aa12.03□□□□□ -0.48
SMG5-204ENST00000476954 IGHV2-26A0A0B4J1V2 119 aa12.02□□□□□ -0.49
SMG5-204ENST00000476954 SLC1A7O00341 560 aa12.02□□□□□ -0.49
SMG5-204ENST00000476954 CX3CR1P49238 355 aa12.02□□□□□ -0.49
SMG5-204ENST00000476954 ACP7Q6ZNF0 438 aa12.02□□□□□ -0.49
SMG5-204ENST00000476954 BATF2Q8N1L9 274 aa12.02□□□□□ -0.49
SMG5-204ENST00000476954 ZNF561Q8N587 486 aa12.02□□□□□ -0.49
SMG5-204ENST00000476954 CSNK2A3Q8NEV1 391 aa12.02□□□□□ -0.49
SMG5-204ENST00000476954 OR4P4Q8NGL7 312 aa12.02□□□□□ -0.49
SMG5-204ENST00000476954 PIGCQ92535 297 aa12.02□□□□□ -0.49
SMG5-204ENST00000476954 RNFT2Q96EX2 444 aa12.02□□□□□ -0.49
SMG5-204ENST00000476954 KCNG2Q9UJ96 466 aa12.02□□□□□ -0.49
SMG5-204ENST00000476954 LDLRAD4O15165 306 aa12.01□□□□□ -0.49
SMG5-204ENST00000476954 TK1P04183 234 aa12.01□□□□□ -0.49
SMG5-204ENST00000476954 HTR1DP28221 377 aa12.01□□□□□ -0.49
SMG5-204ENST00000476954 NANOGP8Q6NSW7 305 aa12.01□□□□□ -0.49
SMG5-204ENST00000476954 PRSS45Q7RTY3 260 aa12.01□□□□□ -0.49
SMG5-204ENST00000476954 OR51L1Q8NGJ5 315 aa12.01□□□□□ -0.49
SMG5-204ENST00000476954 OR8U1Q8NH10 309 aa12.01□□□□□ -0.49
SMG5-204ENST00000476954 CHPT1Q8WUD6 406 aa12.01□□□□□ -0.49
SMG5-204ENST00000476954 OR8B4Q96RC9 309 aa12.01□□□□□ -0.49
SMG5-204ENST00000476954 TMEM120AQ9BXJ8 343 aa12.01□□□□□ -0.49
SMG5-204ENST00000476954 OR51I2Q9H344 312 aa12.01□□□□□ -0.49
SMG5-204ENST00000476954 BRD7Q9NPI1 651 aa12.01□□□□□ -0.49
SMG5-204ENST00000476954 DNAJC27Q9NZQ0 273 aa12.01□□□□□ -0.49
SMG5-204ENST00000476954 HHLA2Q9UM44 414 aa12.01□□□□□ -0.49
SMG5-204ENST00000476954 TMEM5Q9Y2B1 443 aa12.01□□□□□ -0.49
SMG5-204ENST00000476954 UNC119BA6NIH7 251 aa12□□□□□ -0.49
SMG5-204ENST00000476954 SERPINE3A8MV23 424 aa12□□□□□ -0.49
SMG5-204ENST00000476954 ANGPT2O15123 496 aa12□□□□□ -0.49
SMG5-204ENST00000476954 SPARCP09486 303 aa12□□□□□ -0.49
SMG5-204ENST00000476954 SPNP16150 400 aa12□□□□□ -0.49
SMG5-204ENST00000476954 BRS3P32247 399 aa12□□□□□ -0.49
SMG5-204ENST00000476954 OMPP47874 163 aa12□□□□□ -0.49
SMG5-204ENST00000476954 EIF2B1Q14232 305 aaKnown RBP12□□□□□ -0.49
SMG5-204ENST00000476954 KIR2DS1Q14954 304 aa12□□□□□ -0.49
SMG5-204ENST00000476954 KRT72Q14CN4 511 aa12□□□□□ -0.49
SMG5-204ENST00000476954 SNAPC1Q16533 368 aa12□□□□□ -0.49
SMG5-204ENST00000476954 BAIAP2L2Q6UXY1 529 aa12□□□□□ -0.49
SMG5-204ENST00000476954 RRM2BQ7LG56 351 aa12□□□□□ -0.49
SMG5-204ENST00000476954 OR4C15Q8NGM1 316 aa12□□□□□ -0.49
SMG5-204ENST00000476954 LINC00476Q8WZB0 136 aa12□□□□□ -0.49
SMG5-204ENST00000476954 AQP3Q92482 292 aa12□□□□□ -0.49
SMG5-204ENST00000476954 TNCP24821 2201 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms