RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 HIKESHIQ53FT3 197 aa13.31□□□□□ -0.28
RPUSD3-215ENST00000475470 ATPAF1Q5TC12 328 aaPredicted RBP13.31□□□□□ -0.28
RPUSD3-215ENST00000475470 C9orf62Q8N4C0 152 aa13.31□□□□□ -0.28
RPUSD3-215ENST00000475470 OR11H4Q8NGC9 324 aa13.31□□□□□ -0.28
RPUSD3-215ENST00000475470 SNAPC3Q92966 411 aa13.31□□□□□ -0.28
RPUSD3-215ENST00000475470 TRIB1Q96RU8 372 aa13.31□□□□□ -0.28
RPUSD3-215ENST00000475470 OCSTAMPQ9BR26 566 aa13.31□□□□□ -0.28
RPUSD3-215ENST00000475470 GON7Q9BXV9 100 aa13.31□□□□□ -0.28
RPUSD3-215ENST00000475470 PECRQ9BY49 303 aa13.31□□□□□ -0.28
RPUSD3-215ENST00000475470 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.31□□□□□ -0.28
RPUSD3-215ENST00000475470 GLRX2Q9NS18 164 aa13.31□□□□□ -0.28
RPUSD3-215ENST00000475470 OR4E1P0C645 316 aa13.3□□□□□ -0.28
RPUSD3-215ENST00000475470 ZBTB37Q5TC79 503 aa13.3□□□□□ -0.28
RPUSD3-215ENST00000475470 DPPA2Q7Z7J5 298 aa13.3□□□□□ -0.28
RPUSD3-215ENST00000475470 NANOS1Q8WY41 292 aaKnown RBP13.3□□□□□ -0.28
RPUSD3-215ENST00000475470 REPIN1Q9BWE0 567 aaKnown RBP13.3□□□□□ -0.28
RPUSD3-215ENST00000475470 EIF3KQ9UBQ5 218 aaKnown RBP13.3□□□□□ -0.28
RPUSD3-215ENST00000475470 ZNF850A8MQ14 1090 aa13.3□□□□□ -0.28
RPUSD3-215ENST00000475470 SERPINE3A8MV23 424 aa13.3□□□□□ -0.28
RPUSD3-215ENST00000475470 SS18L1O75177 396 aaPredicted RBP13.3□□□□□ -0.28
RPUSD3-215ENST00000475470 ZNF780AO75290 641 aaPredicted RBP13.3□□□□□ -0.28
RPUSD3-215ENST00000475470 CEACAM4O75871 244 aa13.3□□□□□ -0.28
RPUSD3-215ENST00000475470 NAT1P18440 290 aa13.3□□□□□ -0.28
RPUSD3-215ENST00000475470 GK2Q14410 553 aaPredicted RBP13.3□□□□□ -0.28
RPUSD3-215ENST00000475470 MRPL21Q7Z2W9 205 aaKnown RBP13.3□□□□□ -0.28
RPUSD3-215ENST00000475470 NAXEQ8NCW5 288 aa13.3□□□□□ -0.28
RPUSD3-215ENST00000475470 BCL2L2Q92843 193 aaPredicted RBP13.3□□□□□ -0.28
RPUSD3-215ENST00000475470 FBXW5Q969U6 566 aa13.3□□□□□ -0.28
RPUSD3-215ENST00000475470 CYYR1Q96J86 154 aa13.3□□□□□ -0.28
RPUSD3-215ENST00000475470 POM121L2Q96KW2 1035 aa13.3□□□□□ -0.28
RPUSD3-215ENST00000475470 CLCF1Q9UBD9 225 aa13.3□□□□□ -0.28
RPUSD3-215ENST00000475470 ANAPC10Q9UM13 185 aa13.3□□□□□ -0.28
RPUSD3-215ENST00000475470 ZNF292O60281 2723 aa13.29□□□□□ -0.28
RPUSD3-215ENST00000475470 TOXO94900 526 aa13.29□□□□□ -0.28
RPUSD3-215ENST00000475470 GIPP09681 153 aaPredicted RBP13.29□□□□□ -0.28
RPUSD3-215ENST00000475470 APLNRP35414 380 aa13.29□□□□□ -0.28
RPUSD3-215ENST00000475470 UBE2MP61081 183 aaKnown RBP13.29□□□□□ -0.28
RPUSD3-215ENST00000475470 ACTBL2Q562R1 376 aa13.29□□□□□ -0.28
RPUSD3-215ENST00000475470 ZADH2Q8N4Q0 377 aa13.29□□□□□ -0.28
RPUSD3-215ENST00000475470 GRPEL2Q8TAA5 225 aa13.29□□□□□ -0.28
RPUSD3-215ENST00000475470 Q96M66 194 aa13.29□□□□□ -0.28
RPUSD3-215ENST00000475470 ST6GALNAC5Q9BVH7 336 aa13.29□□□□□ -0.28
RPUSD3-215ENST00000475470 PLEKHJ1Q9NW61 149 aa13.29□□□□□ -0.28
RPUSD3-215ENST00000475470 URB1O60287 2271 aaKnown RBP13.29□□□□□ -0.28
RPUSD3-215ENST00000475470 AQP7O14520 342 aa13.29□□□□□ -0.28
RPUSD3-215ENST00000475470 WISP2O76076 250 aa13.29□□□□□ -0.28
RPUSD3-215ENST00000475470 MICBQ29980 383 aa13.29□□□□□ -0.28
RPUSD3-215ENST00000475470 GCNT2Q8N0V5 402 aa13.29□□□□□ -0.28
RPUSD3-215ENST00000475470 OR2AK2Q8NG84 335 aa13.29□□□□□ -0.28
RPUSD3-215ENST00000475470 OR56B2PQ8NGI1 322 aa13.29□□□□□ -0.28
RPUSD3-215ENST00000475470 ST8SIA4Q92187 359 aa13.29□□□□□ -0.28
RPUSD3-215ENST00000475470 PAPOLGQ9BWT3 736 aaKnown RBP13.29□□□□□ -0.28
RPUSD3-215ENST00000475470 MYOZ1Q9NP98 299 aaPredicted RBP13.29□□□□□ -0.28
RPUSD3-215ENST00000475470 VSIG4Q9Y279 399 aa13.29□□□□□ -0.28
RPUSD3-215ENST00000475470 SERPINA5P05154 406 aa13.28□□□□□ -0.28
RPUSD3-215ENST00000475470 PDZK1IP1Q13113 114 aa13.28□□□□□ -0.28
RPUSD3-215ENST00000475470 HLXQ14774 488 aaPredicted RBP13.28□□□□□ -0.28
RPUSD3-215ENST00000475470 NKAPLQ5M9Q1 402 aa13.28□□□□□ -0.28
RPUSD3-215ENST00000475470 RTL6Q6ICC9 239 aa13.28□□□□□ -0.28
RPUSD3-215ENST00000475470 ASCL4Q6XD76 172 aa13.28□□□□□ -0.28
RPUSD3-215ENST00000475470 C6orf201Q7Z4U5 140 aa13.28□□□□□ -0.28
RPUSD3-215ENST00000475470 ZDHHC22Q8N966 263 aa13.28□□□□□ -0.28
RPUSD3-215ENST00000475470 SARAFQ96BY9 339 aa13.28□□□□□ -0.28
RPUSD3-215ENST00000475470 PIPOXQ9P0Z9 390 aa13.28□□□□□ -0.28
RPUSD3-215ENST00000475470 STARD10Q9Y365 291 aa13.28□□□□□ -0.28
RPUSD3-215ENST00000475470 RIF1Q5UIP0 2472 aaKnown RBP13.28□□□□□ -0.28
RPUSD3-215ENST00000475470 ZFHX2Q9C0A1 2572 aaPredicted RBP13.28□□□□□ -0.28
RPUSD3-215ENST00000475470 GOSR2O14653 212 aa13.28□□□□□ -0.28
RPUSD3-215ENST00000475470 OR2A4O95047 310 aa13.28□□□□□ -0.28
RPUSD3-215ENST00000475470 NGFP01138 241 aa13.28□□□□□ -0.28
RPUSD3-215ENST00000475470 AMY2BP19961 511 aa13.28□□□□□ -0.28
RPUSD3-215ENST00000475470 RAP2BP61225 183 aa13.28□□□□□ -0.28
RPUSD3-215ENST00000475470 C17orf107Q6ZR85 190 aa13.28□□□□□ -0.28
RPUSD3-215ENST00000475470 HOGA1Q86XE5 327 aa13.28□□□□□ -0.28
RPUSD3-215ENST00000475470 OR5M9Q8NGP3 310 aa13.28□□□□□ -0.28
RPUSD3-215ENST00000475470 OR5H2Q8NGV7 314 aa13.28□□□□□ -0.28
RPUSD3-215ENST00000475470 OR2A7Q96R45 310 aa13.28□□□□□ -0.28
RPUSD3-215ENST00000475470 GPR160Q9UJ42 338 aa13.28□□□□□ -0.28
RPUSD3-215ENST00000475470 TNRC6AQ8NDV7 1962 aaKnown RBP13.27□□□□□ -0.28
RPUSD3-215ENST00000475470 MED12LQ86YW9 2145 aa13.27□□□□□ -0.28
RPUSD3-215ENST00000475470 H3BUI4 141 aa13.27□□□□□ -0.29
RPUSD3-215ENST00000475470 EFSO43281 561 aa13.27□□□□□ -0.29
RPUSD3-215ENST00000475470 TSC22D2O75157 780 aa13.27□□□□□ -0.29
RPUSD3-215ENST00000475470 PPA1Q15181 289 aa13.27□□□□□ -0.29
RPUSD3-215ENST00000475470 TAF9Q16594 264 aa13.27□□□□□ -0.29
RPUSD3-215ENST00000475470 VAX1Q5SQQ9 334 aa13.27□□□□□ -0.29
RPUSD3-215ENST00000475470 C11orf88Q6PI97 169 aa13.27□□□□□ -0.29
RPUSD3-215ENST00000475470 MDP1Q86V88 176 aa13.27□□□□□ -0.29
RPUSD3-215ENST00000475470 C12orf45Q8N5I9 185 aaPredicted RBP13.27□□□□□ -0.29
RPUSD3-215ENST00000475470 PXT1Q8NFP0 134 aa13.27□□□□□ -0.29
RPUSD3-215ENST00000475470 OR51F2Q8NH61 342 aa13.27□□□□□ -0.29
RPUSD3-215ENST00000475470 MRGPRFQ96AM1 343 aa13.27□□□□□ -0.29
RPUSD3-215ENST00000475470 FAM186AA6NE01 2351 aa13.27□□□□□ -0.29
RPUSD3-215ENST00000475470 IGKV1-12A0A0C4DH73 117 aa13.27□□□□□ -0.29
RPUSD3-215ENST00000475470 OR2AT4A6NND4 320 aa13.27□□□□□ -0.29
RPUSD3-215ENST00000475470 CA11O75493 328 aa13.27□□□□□ -0.29
RPUSD3-215ENST00000475470 SIX6O95475 246 aa13.27□□□□□ -0.29
RPUSD3-215ENST00000475470 IGKV1D-12P01611 117 aa13.27□□□□□ -0.29
RPUSD3-215ENST00000475470 HTR2BP41595 481 aa13.27□□□□□ -0.29
RPUSD3-215ENST00000475470 OR3A3P47888 321 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms