RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 A0A1W2PPZ6 126 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 C5orf49A4QMS7 147 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 FAM90A10PA6NDY2 464 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 FAM90A18PA6NE21 464 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 FAM90A16PA6NEW6 464 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 FAM90A20PA6NIJ5 464 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 FAM90A8PA6NJQ4 464 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 FAM90A7PA6NKC0 464 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 CEACAM18A8MTB9 384 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 FAM90A22PA8MWA6 464 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 FAM90A12PA8MX19 464 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 FAM90A5PA8MXJ8 464 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 FAM90A23PA8MXZ1 464 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 OR4E1P0C645 316 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 FAM90A15PP0C7V4 464 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 FAM90A13PP0C7W8 464 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 FAM90A14PP0C7W9 464 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 FAM90A24PP0C7X0 464 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 MRPL49Q13405 166 aaKnown RBP18.85■□□□□ 0.61
CCM2-206ENST00000474617 C3AR1Q16581 482 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 PLCXD3Q63HM9 321 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 NSUN5P2Q63ZY6 315 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 ZNF767PQ75MW2 155 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 RNF144BQ7Z419 303 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 C9orf62Q8N4C0 152 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 PECRQ9BY49 303 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 TMPRSS13Q9BYE2 586 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 CHST6Q9GZX3 395 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 DLL3Q9NYJ7 618 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 FAM230AA0A1W2PPH8 454 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 AHRRA9YTQ3 701 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 IL18BPO95998 194 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 WT1P19544 449 aaPredicted RBP18.84■□□□□ 0.61
CCM2-206ENST00000474617 HRH1P35367 487 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 ATPAF1Q5TC12 328 aaPredicted RBP18.84■□□□□ 0.61
CCM2-206ENST00000474617 FAM214BQ7L5A3 538 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 NLRC3Q7RTR2 1065 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 C1QL2Q7Z5L3 287 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 SLC25A42Q86VD7 318 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 OR2AK2Q8NG84 335 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 OR5D18Q8NGL1 313 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 OR13C8Q8NGS7 320 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 OR2T35Q8NGX2 323 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 LRFN3Q9BTN0 628 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 ELF5Q9UKW6 265 aaPredicted RBP18.84■□□□□ 0.61
CCM2-206ENST00000474617 MGAT4AQ9UM21 535 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 HSPB11Q9Y547 144 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 DNAJC13O75165 2243 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 ZNF407Q9C0G0 2248 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 DHODHQ02127 395 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 PDZK1IP1Q13113 114 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 ZNF169Q14929 603 aaPredicted RBP18.84■□□□□ 0.61
CCM2-206ENST00000474617 GUSBP1Q15486 140 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 SCGB2B2Q4G0G5 96 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 MOB3CQ70IA8 216 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 C1orf162Q8NEQ5 155 aaPredicted RBP18.84■□□□□ 0.61
CCM2-206ENST00000474617 Q8NFD4 153 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 OR4S1Q8NGB4 309 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 OR5H2Q8NGV7 314 aa18.84■□□□□ 0.61
CCM2-206ENST00000474617 NOP16Q9Y3C1 178 aaKnown RBP18.84■□□□□ 0.61
CCM2-206ENST00000474617 DTYMKP23919 212 aa18.83■□□□□ 0.6
CCM2-206ENST00000474617 SURF2Q15527 256 aaPredicted RBP18.83■□□□□ 0.6
CCM2-206ENST00000474617 TMEM200AQ86VY9 491 aa18.83■□□□□ 0.6
CCM2-206ENST00000474617 TERB2Q8NHR7 220 aa18.83■□□□□ 0.6
CCM2-206ENST00000474617 PLEKHJ1Q9NW61 149 aa18.83■□□□□ 0.6
CCM2-206ENST00000474617 PRSS50Q9UI38 385 aa18.83■□□□□ 0.6
CCM2-206ENST00000474617 A0A1W2PP11 408 aa18.82■□□□□ 0.6
CCM2-206ENST00000474617 AMY2BP19961 511 aa18.82■□□□□ 0.6
CCM2-206ENST00000474617 EIF2S3LQ2VIR3 472 aaKnown RBP18.82■□□□□ 0.6
CCM2-206ENST00000474617 C9orf135Q5VTT2 229 aa18.82■□□□□ 0.6
CCM2-206ENST00000474617 TFAP2EQ6VUC0 442 aa18.82■□□□□ 0.6
CCM2-206ENST00000474617 Q6ZT83 130 aa18.82■□□□□ 0.6
CCM2-206ENST00000474617 OSR2Q8N2R0 312 aa18.82■□□□□ 0.6
CCM2-206ENST00000474617 MUC20Q8N307 709 aaPredicted RBP18.82■□□□□ 0.6
CCM2-206ENST00000474617 C12orf45Q8N5I9 185 aaPredicted RBP18.82■□□□□ 0.6
CCM2-206ENST00000474617 GVQW1Q8N7I0 195 aa18.82■□□□□ 0.6
CCM2-206ENST00000474617 OR6K3Q8NGY3 331 aa18.82■□□□□ 0.6
CCM2-206ENST00000474617 PIGCQ92535 297 aa18.82■□□□□ 0.6
CCM2-206ENST00000474617 MPC1Q9Y5U8 109 aa18.82■□□□□ 0.6
CCM2-206ENST00000474617 RRP8O43159 456 aaKnown RBP18.81■□□□□ 0.6
CCM2-206ENST00000474617 HTR3BO95264 441 aa18.81■□□□□ 0.6
CCM2-206ENST00000474617 OR3A3P47888 321 aa18.81■□□□□ 0.6
CCM2-206ENST00000474617 GMFBP60983 142 aa18.81■□□□□ 0.6
CCM2-206ENST00000474617 SRSF6Q13247 344 aaKnown RBP18.81■□□□□ 0.6
CCM2-206ENST00000474617 GRK1Q15835 563 aa18.81■□□□□ 0.6
CCM2-206ENST00000474617 TBC1D28Q2M2D7 210 aa18.81■□□□□ 0.6
CCM2-206ENST00000474617 CEACAM21Q3KPI0 293 aa18.81■□□□□ 0.6
CCM2-206ENST00000474617 LAMTOR1Q6IAA8 161 aa18.81■□□□□ 0.6
CCM2-206ENST00000474617 CD163Q86VB7 1156 aa18.81■□□□□ 0.6
CCM2-206ENST00000474617 ZDHHC23Q8IYP9 409 aa18.81■□□□□ 0.6
CCM2-206ENST00000474617 FBXW5Q969U6 566 aa18.81■□□□□ 0.6
CCM2-206ENST00000474617 MS4A3Q96HJ5 214 aa18.81■□□□□ 0.6
CCM2-206ENST00000474617 GPR137Q96N19 417 aa18.81■□□□□ 0.6
CCM2-206ENST00000474617 HIST1H2AAQ96QV6 131 aa18.81■□□□□ 0.6
CCM2-206ENST00000474617 C12orf49Q9H741 205 aa18.81■□□□□ 0.6
CCM2-206ENST00000474617 RHOFQ9HBH0 211 aa18.81■□□□□ 0.6
CCM2-206ENST00000474617 CSAG2Q9Y5P2 127 aa18.81■□□□□ 0.6
CCM2-206ENST00000474617 PQLC2LA1A4F0 135 aa18.8■□□□□ 0.6
CCM2-206ENST00000474617 IL2RAP01589 272 aa18.8■□□□□ 0.6
CCM2-206ENST00000474617 HLA-GP17693 338 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms