RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 LY6DQ14210 128 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 RSU1Q15404 277 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 ZNF260Q3ZCT1 412 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 SLC22A6Q4U2R8 563 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 SPATA46Q5T0L3 261 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 OR2T2Q6IF00 324 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 PCSK4Q6UW60 755 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 SEZ6L2Q6UXD5 910 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 C1QL2Q7Z5L3 287 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 SAXO1Q8IYX7 474 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 FAM89BQ8N5H3 189 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 ZSCAN4Q8NAM6 433 aaPredicted RBP8.05□□□□□ -1.12
VPS52-216ENST00000471309 BHLHE23Q8NDY6 225 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 OR56B1Q8NGI3 324 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 OR5A2Q8NGI9 324 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 OR10R2Q8NGX6 335 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 ENKURQ8TC29 256 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 GPX8Q8TED1 209 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 AQP3Q92482 292 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 MARS2Q96GW9 593 aaKnown RBP8.05□□□□□ -1.12
VPS52-216ENST00000471309 CCDC120Q96HB5 630 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 HIST1H2AAQ96QV6 131 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 GAL3ST1Q99999 423 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 NICN1Q9BSH3 213 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 OR2J1Q9GZK6 312 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 METTL9Q9H1A3 318 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 TAS2R8Q9NYW2 309 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 NPAP1Q9NZP6 1156 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 CRIM1Q9NZV1 1036 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 MTFP1Q9UDX5 166 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 METRNQ9UJH8 293 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 ING4Q9UNL4 249 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 NOP16Q9Y3C1 178 aaKnown RBP8.05□□□□□ -1.12
VPS52-216ENST00000471309 SPENQ96T58 3664 aaKnown RBP8.05□□□□□ -1.12
VPS52-216ENST00000471309 INTS1Q8N201 2190 aaKnown RBP8.05□□□□□ -1.12
VPS52-216ENST00000471309 A0A0A6YYD4 124 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 ANKRD20A5PA0PJZ0 165 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 NAP1L6A6NFF2 107 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 WIPF3A6NGB9 483 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 FOXI3A8MTJ6 420 aaPredicted RBP8.04□□□□□ -1.12
VPS52-216ENST00000471309 M0R1B8 84 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 SPRY1O43609 319 aaPredicted RBP8.04□□□□□ -1.12
VPS52-216ENST00000471309 ANGPTL7O43827 346 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 LILRA1O75019 489 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 MELTFP08582 738 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 GSTP1P09211 210 aaKnown RBP8.04□□□□□ -1.12
VPS52-216ENST00000471309 CSF1P09603 554 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 GSTT2BP0CG30 244 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 PTHLHP12272 177 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 GTF2F2P13984 249 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 PPP3CBP16298 524 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 SERPINA2P20848 420 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 SLC6A1P30531 599 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 CALCRP30988 508 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 BTCP35070 178 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 SRP9P49458 86 aaKnown RBP8.04□□□□□ -1.12
VPS52-216ENST00000471309 VEGFCP49767 419 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 ZNF83P51522 516 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 ACTBP60709 375 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 ERVS71-1P61550 626 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 ACTG1P63261 375 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 MBNL2Q5VZF2 373 aaKnown RBP8.04□□□□□ -1.12
VPS52-216ENST00000471309 OLFML2AQ68BL7 652 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 MTFR2Q6P444 385 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 Q6ZTK2 550 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 ZNF611Q8N823 705 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 DUSP18Q8NEJ0 188 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 KLF14Q8TD94 323 aaPredicted RBP8.04□□□□□ -1.12
VPS52-216ENST00000471309 CMBLQ96DG6 245 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 MRPS24Q96EL2 167 aaKnown RBP8.04□□□□□ -1.12
VPS52-216ENST00000471309 Q96M66 194 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 FGF23Q9GZV9 251 aaPredicted RBP8.04□□□□□ -1.12
VPS52-216ENST00000471309 BANF2Q9H503 90 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 ELL3Q9HB65 397 aaPredicted RBP8.04□□□□□ -1.12
VPS52-216ENST00000471309 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.04□□□□□ -1.12
VPS52-216ENST00000471309 PCDHB16Q9NRJ7 776 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 KLK11Q9UBX7 282 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 ZNF107Q9UII5 783 aaPredicted RBP8.04□□□□□ -1.12
VPS52-216ENST00000471309 ZFYVE26Q68DK2 2539 aa8.04□□□□□ -1.12
VPS52-216ENST00000471309 IGKV1-12A0A0C4DH73 117 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 FAM240BA0A1B0GVZ2 78 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 FUOMA2VDF0 154 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 ZNF732B4DXR9 585 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 MFNGO00587 321 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 AKR7A2O43488 359 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 RBBP9O75884 186 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 PLATP00750 562 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 IGKV1D-12P01611 117 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 CRYAAP02489 173 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 CSTBP04080 98 aaKnown RBP8.03□□□□□ -1.12
VPS52-216ENST00000471309 HIST1H1DP16402 221 aaKnown RBP8.03□□□□□ -1.12
VPS52-216ENST00000471309 KITLGP21583 273 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 CA6P23280 308 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 MPV17P39210 176 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 KIR2DL3P43628 341 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 ASCL1P50553 236 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 GPM6AP51674 278 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 GNG3P63215 75 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 GUCA2AQ02747 115 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 PSG7Q13046 419 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms