RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 IL22RA2Q969J5 263 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 PNPLA2Q96AD5 504 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 ZG16BQ96DA0 208 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 SPATA33Q96N06 139 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 UHRF2Q96PU4 802 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 TSPAN32Q96QS1 320 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 FOXB1Q99853 325 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 NDFIP1Q9BT67 221 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 CABLES2Q9BTV7 478 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 DOHHQ9BU89 302 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 EFCAB11Q9BUY7 163 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 FAIM2Q9BWQ8 316 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 LPAR5Q9H1C0 372 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 OR51E2Q9H255 320 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 CHST8Q9H2A9 424 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 KCNK15Q9H427 330 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 FAM124BQ9H5Z6 455 aaPredicted RBP4.49□□□□□ -1.69
COL3A1-205ENST00000470167 RNF167Q9H6Y7 350 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 CLN6Q9NWW5 311 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 SPANXCQ9NY87 97 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 TAS2R16Q9NYV7 291 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 PRSS50Q9UI38 385 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 SLC45A2Q9UMX9 530 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 MRPS16Q9Y3D3 137 aaKnown RBP4.49□□□□□ -1.69
COL3A1-205ENST00000470167 HDGFL3Q9Y3E1 203 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 WSB1Q9Y6I7 421 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 V9GYY9 64 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 UTRNP46939 3433 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 CACNA1GO43497 2377 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 BORCS7-ASMTA0A0B4J1R7 106 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 CENPVL1A0A0U1RR11 272 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 CENPVL3A0A0U1RRI6 287 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 LOC100130705A0A1B0GUX0 176 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 GXYLT2A0PJZ3 443 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 C7orf77A4D0Y5 90 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 SH2D7A6NKC9 451 aaPredicted RBP4.48□□□□□ -1.69
COL3A1-205ENST00000470167 FAM183AA6NL82 134 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 SHISA7A6NL88 538 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 DCTN6O00399 190 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 HSD17B6O14756 317 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 PRICKLE3O43900 615 aaPredicted RBP4.48□□□□□ -1.69
COL3A1-205ENST00000470167 FGF17O60258 216 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 ENTPD6O75354 484 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 FCN3O75636 299 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 SEMA4FO95754 770 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 TIMP1P01033 207 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 ALDOBP05062 364 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 GADD45AP24522 165 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 HTR1DP28221 377 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 HOXD9P28356 352 aaPredicted RBP4.48□□□□□ -1.69
COL3A1-205ENST00000470167 FGF9P31371 208 aaPredicted RBP4.48□□□□□ -1.69
COL3A1-205ENST00000470167 PRDX2P32119 198 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 CRYBB2P43320 205 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 KIR2DS4P43632 304 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 XCR1P46094 333 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 NUDT2P50583 147 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 DAP3P51398 398 aaKnown RBP4.48□□□□□ -1.69
COL3A1-205ENST00000470167 DVL1P1P54792 670 aaPredicted RBP4.48□□□□□ -1.69
COL3A1-205ENST00000470167 RAB10P61026 200 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 ISL1P61371 349 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 RHOAP61586 193 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 PITX1P78337 314 aaPredicted RBP4.48□□□□□ -1.69
COL3A1-205ENST00000470167 ROM1Q03395 351 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 ARHGAP1Q07960 439 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 EDDM3AQ14507 147 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 ACKR1Q16570 336 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 VWC2Q2TAL6 325 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 CTU2Q2VPK5 515 aaKnown RBP4.48□□□□□ -1.69
COL3A1-205ENST00000470167 ATP6AP1LQ52LC2 224 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 TRMT12Q53H54 448 aaKnown RBP4.48□□□□□ -1.69
COL3A1-205ENST00000470167 LRRC10Q5BKY1 277 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 FAM182AQ5T1J6 154 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 OTUD3Q5T2D3 398 aaPredicted RBP4.48□□□□□ -1.69
COL3A1-205ENST00000470167 STUMQ69YW2 141 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 DGAT2L7PQ6IED9 249 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 LCN8Q6JVE9 175 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 ZNF474Q6S9Z5 364 aaPredicted RBP4.48□□□□□ -1.69
COL3A1-205ENST00000470167 CEACAM20Q6UY09 585 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 FOXI2Q6ZQN5 318 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 TSEN54Q7Z6J9 526 aaKnown RBP4.48□□□□□ -1.69
COL3A1-205ENST00000470167 GPSM1Q86YR5 675 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 APRG1Q8IVJ8 170 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 UMODL1-AS1Q8N2C9 162 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 PNKDQ8N490 385 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 ZNF439Q8NDP4 499 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 GPR26Q8NDV2 337 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 ACVR1CQ8NER5 493 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 GPR32P1Q8NGA4 272 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 OR4N2Q8NGD1 307 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 OR1J4Q8NGS1 313 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 OR1J1Q8NGS3 322 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 OR13C6PQ8NH95 151 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 ZNRF2Q8NHG8 242 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 PROKR1Q8TCW9 393 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 TMEM174Q8WUU8 243 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 TMEM106AQ96A25 262 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 RNF183Q96D59 192 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 RSPRY1Q96DX4 576 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 BTF3L4Q96K17 158 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 KCTD7Q96MP8 289 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms