RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 TRBV5-7A0A0A0MS05 114 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 IGHV1-69DA0A0B4J2H0 117 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 CENPVL3A0A0U1RRI6 287 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 A0A1W2PPV4 95 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 LINC01548A6NM66 108 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 TMEM178BH3BS89 294 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 CFLARO15519 480 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 C6orf47O95873 294 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 IFNA14P01570 189 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 IGHV1-69P01742 117 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 DBIP07108 87 aaKnown RBP4.44□□□□□ -1.7
PTCD3-207ENST00000467273 FBP1P09467 338 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 LAMP1P11279 417 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 CCL2P13500 99 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 MMP9P14780 707 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 IL7RP16871 459 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 EFNA1P20827 205 aaPredicted RBP4.44□□□□□ -1.7
PTCD3-207ENST00000467273 RPS4Y1P22090 263 aaKnown RBP4.44□□□□□ -1.7
PTCD3-207ENST00000467273 GABRA5P31644 462 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 CFHR2P36980 270 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 FGF12P61328 243 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 RPL38P63173 70 aaKnown RBP4.44□□□□□ -1.7
PTCD3-207ENST00000467273 HBA1P69905 142 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 SLC36A2Q495M3 483 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 XKR7Q5GH72 579 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 CASC10Q5T4H9 136 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 FAM219BQ5XKK7 198 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 PLCXD3Q63HM9 321 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 SLC27A4Q6P1M0 643 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 DLEU7Q6UYE1 221 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 ZNF66Q6ZN08 573 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 LRRC74BQ6ZQY2 392 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 KCTD8Q6ZWB6 473 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 SKA3Q8IX90 412 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 FAM58AQ8N1B3 248 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 SLC22A24Q8N4F4 322 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 MINDY2Q8NBR6 621 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 PAPD5Q8NDF8 572 aaKnown RBP4.44□□□□□ -1.7
PTCD3-207ENST00000467273 OR5T1Q8NG75 326 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 OR7A2PQ8NGA2 310 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 OR8B3Q8NGG8 313 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 OR13F1Q8NGS4 319 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 OR5R1Q8NH85 324 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 FBXO25Q8TCJ0 367 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 KLF14Q8TD94 323 aaPredicted RBP4.44□□□□□ -1.7
PTCD3-207ENST00000467273 WIPF2Q8TF74 440 aaPredicted RBP4.44□□□□□ -1.7
PTCD3-207ENST00000467273 C10orf82Q8WW14 230 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 C3orf30Q96M34 536 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 OR8B2Q96RD0 313 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 CDRT15Q96T59 188 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 ARHGDIGQ99819 225 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 ALG12Q9BV10 488 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 ABHD6Q9BV23 337 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 ANKRD60Q9BZ19 345 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 DPY30Q9C005 99 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 OR51V1Q9H2C8 321 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 RANBP3Q9H6Z4 567 aaPredicted RBP4.44□□□□□ -1.7
PTCD3-207ENST00000467273 MTHFD2LQ9H903 347 aaPredicted RBP4.44□□□□□ -1.7
PTCD3-207ENST00000467273 EIF3KQ9UBQ5 218 aaKnown RBP4.44□□□□□ -1.7
PTCD3-207ENST00000467273 CLN8Q9UBY8 286 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 A4GNTQ9UNA3 340 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 PPP1R3CQ9UQK1 317 aa4.44□□□□□ -1.7
PTCD3-207ENST00000467273 SAMHD1Q9Y3Z3 626 aaKnown RBP4.44□□□□□ -1.7
PTCD3-207ENST00000467273 NUP214P35658 2090 aaPredicted RBP4.43□□□□□ -1.7
PTCD3-207ENST00000467273 CBY3A6NI87 242 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 CLDN24A6NM45 220 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 ZNF726A6NNF4 738 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 RNF13O43567 381 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 GLCEO94923 617 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 HMGN1P05114 100 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 LYNP07948 512 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 SNRPAP09012 282 aaKnown RBP4.43□□□□□ -1.7
PTCD3-207ENST00000467273 CD40LGP29965 261 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 ALDH3A1P30838 453 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 APLNRP35414 380 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 NAA10P41227 235 aaPredicted RBP4.43□□□□□ -1.7
PTCD3-207ENST00000467273 ERVS71-1P61550 626 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 HSF2Q03933 536 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 EGR4Q05215 589 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 EGFEM1PQ0D2K5 195 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 FUT5Q11128 374 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 PPP1R8Q12972 351 aaKnown RBP4.43□□□□□ -1.7
PTCD3-207ENST00000467273 ZNF181Q2M3W8 571 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 ANKRD55Q3KP44 614 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 MTX3Q5HYI7 312 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 ENTPD8Q5MY95 495 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 MRPL2Q5T653 305 aaKnown RBP4.43□□□□□ -1.7
PTCD3-207ENST00000467273 PRAMEF5Q5TYX0 476 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 PRAMEF6Q5VXH4 476 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 SLC35E4Q6ICL7 350 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 C1orf94Q6P1W5 598 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 FAM57BQ71RH2 274 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 IGFN1Q86VF2 1251 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 VRK2Q86Y07 508 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 FAM219AQ8IW50 185 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 RIMKLAQ8IXN7 391 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 C1orf87Q8N0U7 546 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 SLC35F6Q8N357 371 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 OR6N1Q8NGY5 312 aa4.43□□□□□ -1.7
PTCD3-207ENST00000467273 OR5AK3PQ8NH89 298 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms