RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 C1orf147Q96MC9 270 aaPredicted RBP12.27□□□□□ -0.45
NCK1-202ENST00000460960 OR5M11Q96RB7 305 aa12.27□□□□□ -0.45
NCK1-202ENST00000460960 DIRC2Q96SL1 478 aa12.27□□□□□ -0.45
NCK1-202ENST00000460960 MRI1Q9BV20 369 aa12.27□□□□□ -0.45
NCK1-202ENST00000460960 EGLN1Q9GZT9 426 aa12.27□□□□□ -0.45
NCK1-202ENST00000460960 MS4A7Q9GZW8 240 aaPredicted RBP12.27□□□□□ -0.45
NCK1-202ENST00000460960 GCM1Q9NP62 436 aa12.27□□□□□ -0.45
NCK1-202ENST00000460960 UFSP2Q9NUQ7 469 aa12.27□□□□□ -0.45
NCK1-202ENST00000460960 IL19Q9UHD0 177 aa12.27□□□□□ -0.45
NCK1-202ENST00000460960 ZNF391Q9UJN7 358 aa12.27□□□□□ -0.45
NCK1-202ENST00000460960 LSM2Q9Y333 95 aaKnown RBP12.27□□□□□ -0.45
NCK1-202ENST00000460960 IGHV3OR16-10A0A075B7F0 116 aa12.26□□□□□ -0.45
NCK1-202ENST00000460960 PNMA8CA0A1B0GUJ8 204 aa12.26□□□□□ -0.45
NCK1-202ENST00000460960 POM121CA8CG34 1229 aa12.26□□□□□ -0.45
NCK1-202ENST00000460960 SYT7O43581 403 aa12.26□□□□□ -0.45
NCK1-202ENST00000460960 CST4P01036 141 aa12.26□□□□□ -0.45
NCK1-202ENST00000460960 MDKP21741 143 aaPredicted RBP12.26□□□□□ -0.45
NCK1-202ENST00000460960 CD200P41217 278 aa12.26□□□□□ -0.45
NCK1-202ENST00000460960 MAP2K4P45985 399 aa12.26□□□□□ -0.45
NCK1-202ENST00000460960 MAP2K3P46734 347 aa12.26□□□□□ -0.45
NCK1-202ENST00000460960 TGM4P49221 684 aa12.26□□□□□ -0.45
NCK1-202ENST00000460960 CCR9P51686 369 aa12.26□□□□□ -0.45
NCK1-202ENST00000460960 GBX2P52951 348 aaPredicted RBP12.26□□□□□ -0.45
NCK1-202ENST00000460960 CSNK2BP67870 215 aa12.26□□□□□ -0.45
NCK1-202ENST00000460960 ZNF154Q13106 437 aa12.26□□□□□ -0.45
NCK1-202ENST00000460960 CDK5R1Q15078 307 aa12.26□□□□□ -0.45
NCK1-202ENST00000460960 FAM201AQ5SY85 155 aa12.26□□□□□ -0.45
NCK1-202ENST00000460960 TMPRSS11AQ6ZMR5 421 aa12.26□□□□□ -0.45
NCK1-202ENST00000460960 ZNF826PQ6ZT77 177 aa12.26□□□□□ -0.45
NCK1-202ENST00000460960 CSNK2A3Q8NEV1 391 aa12.26□□□□□ -0.45
NCK1-202ENST00000460960 OR13C5Q8NGS8 318 aa12.26□□□□□ -0.45
NCK1-202ENST00000460960 ADAT3Q96EY9 351 aaPredicted RBP12.26□□□□□ -0.45
NCK1-202ENST00000460960 MRPL48Q96GC5 212 aaKnown RBP12.26□□□□□ -0.45
NCK1-202ENST00000460960 ZNF48Q96MX3 618 aaPredicted RBP12.26□□□□□ -0.45
NCK1-202ENST00000460960 CDCA4Q9BXL8 241 aa12.26□□□□□ -0.45
NCK1-202ENST00000460960 GPR173Q9NS66 373 aa12.26□□□□□ -0.45
NCK1-202ENST00000460960 BABAM2Q9NXR7 383 aa12.26□□□□□ -0.45
NCK1-202ENST00000460960 SCN3BQ9NY72 215 aa12.26□□□□□ -0.45
NCK1-202ENST00000460960 TRBV2A0A0J9YWF9 115 aa12.25□□□□□ -0.45
NCK1-202ENST00000460960 ZNF816-ZNF321PA0A0X1KG74 233 aa12.25□□□□□ -0.45
NCK1-202ENST00000460960 A0A1B0GVI7 797 aa12.25□□□□□ -0.45
NCK1-202ENST00000460960 OGG1O15527 345 aa12.25□□□□□ -0.45
NCK1-202ENST00000460960 GMDSO60547 372 aa12.25□□□□□ -0.45
NCK1-202ENST00000460960 ZNF205O95201 554 aa12.25□□□□□ -0.45
NCK1-202ENST00000460960 ISG15P05161 165 aa12.25□□□□□ -0.45
NCK1-202ENST00000460960 GRPP07492 148 aa12.25□□□□□ -0.45
NCK1-202ENST00000460960 RNASE1P07998 156 aaKnown RBP12.25□□□□□ -0.45
NCK1-202ENST00000460960 UBCP0CG48 685 aaKnown RBP12.25□□□□□ -0.45
NCK1-202ENST00000460960 TNFSF4P23510 183 aa12.25□□□□□ -0.45
NCK1-202ENST00000460960 RIPPLY1Q0D2K3 151 aa12.25□□□□□ -0.45
NCK1-202ENST00000460960 KLF17Q5JT82 389 aaPredicted RBP12.25□□□□□ -0.45
NCK1-202ENST00000460960 RBM48Q5RL73 367 aaKnown RBP12.25□□□□□ -0.45
NCK1-202ENST00000460960 TMEM42Q69YG0 159 aa12.25□□□□□ -0.45
NCK1-202ENST00000460960 KRT74Q7RTS7 529 aa12.25□□□□□ -0.45
NCK1-202ENST00000460960 C11orf53Q8IXP5 236 aa12.25□□□□□ -0.45
NCK1-202ENST00000460960 ZNF676Q8N7Q3 588 aa12.25□□□□□ -0.45
NCK1-202ENST00000460960 OR5P3Q8WZ94 311 aa12.25□□□□□ -0.45
NCK1-202ENST00000460960 MYDGFQ969H8 173 aa12.25□□□□□ -0.45
NCK1-202ENST00000460960 PPP1R3CQ9UQK1 317 aa12.25□□□□□ -0.45
NCK1-202ENST00000460960 TPRKBQ9Y3C4 175 aa12.25□□□□□ -0.45
NCK1-202ENST00000460960 NPTNQ9Y639 398 aa12.25□□□□□ -0.45
NCK1-202ENST00000460960 MYL12BO14950 172 aa12.24□□□□□ -0.45
NCK1-202ENST00000460960 RGS10O43665 173 aa12.24□□□□□ -0.45
NCK1-202ENST00000460960 PTBP3O95758 552 aaKnown RBP12.24□□□□□ -0.45
NCK1-202ENST00000460960 CYB5R3P00387 301 aaPredicted RBP12.24□□□□□ -0.45
NCK1-202ENST00000460960 GNALP38405 381 aa12.24□□□□□ -0.45
NCK1-202ENST00000460960 SRP9P49458 86 aaKnown RBP12.24□□□□□ -0.45
NCK1-202ENST00000460960 WNT4P56705 351 aa12.24□□□□□ -0.45
NCK1-202ENST00000460960 SLC9A3R2Q15599 337 aa12.24□□□□□ -0.45
NCK1-202ENST00000460960 DMKNQ6E0U4 476 aaPredicted RBP12.24□□□□□ -0.45
NCK1-202ENST00000460960 MOB3CQ70IA8 216 aa12.24□□□□□ -0.45
NCK1-202ENST00000460960 RNF144BQ7Z419 303 aa12.24□□□□□ -0.45
NCK1-202ENST00000460960 ZDHHC23Q8IYP9 409 aa12.24□□□□□ -0.45
NCK1-202ENST00000460960 C19orf18Q8NEA5 215 aa12.24□□□□□ -0.45
NCK1-202ENST00000460960 FGGYQ96C11 551 aa12.24□□□□□ -0.45
NCK1-202ENST00000460960 CCDC90BQ9GZT6 254 aa12.24□□□□□ -0.45
NCK1-202ENST00000460960 SLITRK2Q9H156 845 aa12.24□□□□□ -0.45
NCK1-202ENST00000460960 RASSF4Q9H2L5 321 aa12.24□□□□□ -0.45
NCK1-202ENST00000460960 Q9H521 79 aa12.24□□□□□ -0.45
NCK1-202ENST00000460960 TMEM106BQ9NUM4 274 aa12.24□□□□□ -0.45
NCK1-202ENST00000460960 CHCHD3Q9NX63 227 aaKnown RBP12.24□□□□□ -0.45
NCK1-202ENST00000460960 ENPP5Q9UJA9 477 aa12.24□□□□□ -0.45
NCK1-202ENST00000460960 PPIAL4EA0A075B759 164 aa12.23□□□□□ -0.45
NCK1-202ENST00000460960 PPIAL4CA0A0B4J2A2 164 aa12.23□□□□□ -0.45
NCK1-202ENST00000460960 TMEM212A6NML5 194 aa12.23□□□□□ -0.45
NCK1-202ENST00000460960 PPIAL4DF5H284 164 aa12.23□□□□□ -0.45
NCK1-202ENST00000460960 TRAPPC2LH3BP13 241 aa12.23□□□□□ -0.45
NCK1-202ENST00000460960 MTRF1O75570 445 aaKnown RBP12.23□□□□□ -0.45
NCK1-202ENST00000460960 NRASP01111 189 aa12.23□□□□□ -0.45
NCK1-202ENST00000460960 PPIAL4FP0DN26 164 aa12.23□□□□□ -0.45
NCK1-202ENST00000460960 ATP6V1B1P15313 513 aa12.23□□□□□ -0.45
NCK1-202ENST00000460960 GATA4P43694 442 aa12.23□□□□□ -0.45
NCK1-202ENST00000460960 GPM6AP51674 278 aa12.23□□□□□ -0.45
NCK1-202ENST00000460960 SEC61A1P61619 476 aaKnown RBP12.23□□□□□ -0.45
NCK1-202ENST00000460960 SRSF4Q08170 494 aaKnown RBP12.23□□□□□ -0.45
NCK1-202ENST00000460960 UBE2V2Q15819 145 aa12.23□□□□□ -0.45
NCK1-202ENST00000460960 TMEM244Q5VVB8 128 aa12.23□□□□□ -0.45
NCK1-202ENST00000460960 RNLSQ5VYX0 342 aa12.23□□□□□ -0.45
NCK1-202ENST00000460960 ASPHD2Q6ICH7 369 aa12.23□□□□□ -0.45
NCK1-202ENST00000460960 RPL22L1Q6P5R6 122 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms