RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 STEAP1Q9UHE8 339 aa12.44□□□□□ -0.42
TNF-208ENST00000449264 PMF1-BGLAPU3KQ54 211 aa12.44□□□□□ -0.42
TNF-208ENST00000449264 RAI1Q7Z5J4 1906 aaPredicted RBP12.44□□□□□ -0.42
TNF-208ENST00000449264 DSCAMO60469 2012 aa12.43□□□□□ -0.42
TNF-208ENST00000449264 CTAG2O75638 210 aa12.43□□□□□ -0.42
TNF-208ENST00000449264 IGHV1-46P01743 117 aa12.43□□□□□ -0.42
TNF-208ENST00000449264 GRPP07492 148 aa12.43□□□□□ -0.42
TNF-208ENST00000449264 SNRPBP14678 240 aaKnown RBP12.43□□□□□ -0.42
TNF-208ENST00000449264 MST1LQ2TV78 715 aa12.43□□□□□ -0.42
TNF-208ENST00000449264 PRAMEF6Q5VXH4 476 aa12.43□□□□□ -0.42
TNF-208ENST00000449264 HAGHLQ6PII5 290 aaPredicted RBP12.43□□□□□ -0.42
TNF-208ENST00000449264 LYPD6Q86Y78 171 aa12.43□□□□□ -0.42
TNF-208ENST00000449264 ZNF611Q8N823 705 aa12.43□□□□□ -0.42
TNF-208ENST00000449264 SPERTQ8NA61 448 aa12.43□□□□□ -0.42
TNF-208ENST00000449264 MCFD2Q8NI22 146 aa12.43□□□□□ -0.42
TNF-208ENST00000449264 OR2V2Q96R30 315 aa12.43□□□□□ -0.42
TNF-208ENST00000449264 ELL3Q9HB65 397 aaPredicted RBP12.43□□□□□ -0.42
TNF-208ENST00000449264 C14orf119Q9NWQ9 140 aa12.43□□□□□ -0.42
TNF-208ENST00000449264 MRPS28Q9Y2Q9 187 aaKnown RBP12.43□□□□□ -0.42
TNF-208ENST00000449264 LOC100289279A0A1B0GTE1 492 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 A0A1B0GWJ7 208 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 A6NLC8 198 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 C17orf100A8MU93 164 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 TPD52L2O43399 206 aaKnown RBP12.42□□□□□ -0.42
TNF-208ENST00000449264 ANGPTL7O43827 346 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 PAHP00439 452 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 SOD3P08294 240 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 TMEM225BP0DP42 221 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 TNFSF4P23510 183 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 ZP1P60852 638 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 TNFAIP6P98066 277 aaPredicted RBP12.42□□□□□ -0.42
TNF-208ENST00000449264 ZNF154Q13106 437 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 MAB21L1Q13394 359 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 SWI5Q1ZZU3 235 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 ZNF404Q494X3 552 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 C1orf100Q5SVJ3 147 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 AGAP6Q5VW22 663 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 ZNF573Q86YE8 665 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 CDH26Q8IXH8 852 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 BATF2Q8N1L9 274 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 LGALS14Q8TCE9 139 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 UFSP2Q9NUQ7 469 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 COMMD3Q9UBI1 195 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 ZDHHC8Q9ULC8 765 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 LAMP3Q9UQV4 416 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 FAM221AA4D161 298 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 LRP5LA4QPB2 252 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 TMEM210A6NLX4 147 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 PTGFRP43088 359 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 TLE4Q04727 773 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 MZT1Q08AG7 82 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 SPRNQ5BIV9 151 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 GLIPR1L1Q6UWM5 242 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 SLC25A26Q70HW3 274 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 OR51D1Q8NGF3 324 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 ITLN1Q8WWA0 313 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 S100A13Q99584 98 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 SMURF1Q9HCE7 757 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 CBLN4Q9NTU7 201 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 ING4Q9UNL4 249 aa12.42□□□□□ -0.42
TNF-208ENST00000449264 DANCRP0C864 163 aa12.41□□□□□ -0.42
TNF-208ENST00000449264 ARSBP15848 533 aa12.41□□□□□ -0.42
TNF-208ENST00000449264 CFPP27918 469 aa12.41□□□□□ -0.42
TNF-208ENST00000449264 CD200P41217 278 aa12.41□□□□□ -0.42
TNF-208ENST00000449264 SRP9P49458 86 aaKnown RBP12.41□□□□□ -0.42
TNF-208ENST00000449264 CCL8P80075 99 aa12.41□□□□□ -0.42
TNF-208ENST00000449264 PDZK1IP1Q13113 114 aa12.41□□□□□ -0.42
TNF-208ENST00000449264 RIN1Q13671 783 aa12.41□□□□□ -0.42
TNF-208ENST00000449264 MPPED2Q15777 294 aa12.41□□□□□ -0.42
TNF-208ENST00000449264 FAM166AQ6J272 317 aa12.41□□□□□ -0.42
TNF-208ENST00000449264 C1QL2Q7Z5L3 287 aa12.41□□□□□ -0.42
TNF-208ENST00000449264 SCCPDHQ8NBX0 429 aa12.41□□□□□ -0.42
TNF-208ENST00000449264 OR5H6Q8NGV6 325 aa12.41□□□□□ -0.42
TNF-208ENST00000449264 OR10K1Q8NGX5 313 aa12.41□□□□□ -0.42
TNF-208ENST00000449264 SLC25A28Q96A46 364 aa12.41□□□□□ -0.42
TNF-208ENST00000449264 FAM3DQ96BQ1 224 aa12.41□□□□□ -0.42
TNF-208ENST00000449264 MEGF10Q96KG7 1140 aa12.41□□□□□ -0.42
TNF-208ENST00000449264 PSMG3-AS1Q96PY0 264 aa12.41□□□□□ -0.42
TNF-208ENST00000449264 VRK1Q99986 396 aaPredicted RBP12.41□□□□□ -0.42
TNF-208ENST00000449264 OR51I2Q9H344 312 aa12.41□□□□□ -0.42
TNF-208ENST00000449264 MS4A5Q9H3V2 200 aa12.41□□□□□ -0.42
TNF-208ENST00000449264 TACC2O95359 2948 aa12.41□□□□□ -0.42
TNF-208ENST00000449264 J3QT63 122 aa12.4□□□□□ -0.42
TNF-208ENST00000449264 CDIPTO14735 213 aa12.4□□□□□ -0.42
TNF-208ENST00000449264 RGS5O15539 181 aa12.4□□□□□ -0.42
TNF-208ENST00000449264 SYNGR1O43759 233 aa12.4□□□□□ -0.42
TNF-208ENST00000449264 CYB5AP00167 134 aa12.4□□□□□ -0.42
TNF-208ENST00000449264 CD37P11049 281 aa12.4□□□□□ -0.42
TNF-208ENST00000449264 SERPINA2P20848 420 aa12.4□□□□□ -0.42
TNF-208ENST00000449264 SLC22A6Q4U2R8 563 aa12.4□□□□□ -0.42
TNF-208ENST00000449264 OR51F2Q8NH61 342 aa12.4□□□□□ -0.42
TNF-208ENST00000449264 FAM46BQ96A09 425 aa12.4□□□□□ -0.42
TNF-208ENST00000449264 SLAMF9Q96A28 289 aa12.4□□□□□ -0.42
TNF-208ENST00000449264 KCTD12Q96CX2 325 aaKnown RBP12.4□□□□□ -0.42
TNF-208ENST00000449264 DIRC2Q96SL1 478 aa12.4□□□□□ -0.42
TNF-208ENST00000449264 DECR2Q9NUI1 292 aa12.4□□□□□ -0.42
TNF-208ENST00000449264 ABRACLQ9P1F3 81 aa12.4□□□□□ -0.42
TNF-208ENST00000449264 OR5V1Q9UGF6 321 aa12.4□□□□□ -0.42
TNF-208ENST00000449264 hCG_1807616A0A1W2PRN6 198 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 RHBDL1O75783 438 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms