RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 A0A0A6YYD4 124 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 TMEM14DPA8MWL7 114 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 RAD51DO75771 328 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 CEBPBP17676 345 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 TAS2R46P59540 309 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 ERN2Q76MJ5 926 aaKnown RBP8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 C17orf78Q8N4C9 275 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 OR52N5Q8NH56 324 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 KTI12Q96EK9 354 aaPredicted RBP8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 ARHGAP5-AS1Q96IT6 56 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 NUDT16L1Q9BRJ7 211 aaKnown RBP8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 FAAP24Q9BTP7 215 aa8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 MRPS23Q9Y3D9 190 aaKnown RBP8.32□□□□□ -1.08
SYNPO2-204ENST00000448416 TMEM210A6NLX4 147 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 HOXA2O43364 376 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 CYB5R3P00387 301 aaPredicted RBP8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 OPN1MWP04001 364 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 OPN1MW2P0DN77 364 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 OPN1MW3P0DN78 364 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 ZNF10P21506 573 aaPredicted RBP8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 ZNF93P35789 620 aaPredicted RBP8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 RAB11AP62491 216 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 TRA2AQ13595 282 aaKnown RBP eCLIP8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 CHRFAM7AQ494W8 412 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 ZNF506Q5JVG8 444 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 C1orf194Q5T5A4 169 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 ABLIM2Q6H8Q1 611 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 WBP2NLQ6ICG8 309 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 GLIPR1L1Q6UWM5 242 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 ADAMTSL4Q6UY14 1074 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 ZNF66Q6ZN08 573 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 SLC25A26Q70HW3 274 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 NEK7Q8TDX7 302 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 LIPHQ8WWY8 451 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 CCNL2Q96S94 520 aaPredicted RBP8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 LMF2Q9BU23 707 aaKnown RBP8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 ANAPC10Q9UM13 185 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 OBSL1O75147 1896 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 TCF21O43680 179 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 ISG15P05161 165 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 CYBAP13498 195 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 ATP6V0CP27449 155 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 BPIFB3P59826 476 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 VAMP2P63027 116 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 PLPP4Q5VZY2 271 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 DIRC2Q96SL1 478 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 G6PC2Q9NQR9 355 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 TMEM242Q9NWH2 141 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 LOC101059948A0A1B0GTJ6 334 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 TUBG1P23258 451 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 TMEM50BP56557 158 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 SSPNQ14714 243 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 DGAT2L6Q6ZPD8 337 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 SLC26A10Q8NG04 563 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 OR8G5Q8NG78 346 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 SRD5A3Q9H8P0 318 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 CENPMQ9NSP4 180 aa8.31□□□□□ -1.08
SYNPO2-204ENST00000448416 ZNF878C9JN71 531 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 SOD2P04179 222 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 FOLR1P15328 257 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 EGR4Q05215 589 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 CLN3Q13286 438 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 BATFQ16520 125 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 SP6Q3SY56 376 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 FBXW12Q6X9E4 464 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 PRSS41Q7RTY9 318 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 ATG4DQ86TL0 474 aaPredicted RBP8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 ADAT3Q96EY9 351 aaPredicted RBP8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 TMEM59Q9BXS4 323 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 MRPS28Q9Y2Q9 187 aaKnown RBP8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 CHD3Q12873 2000 aaKnown RBP8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 A0A1B0GU03 582 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 PRSS37A4D1T9 235 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 MPZL1O95297 269 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 JMJD7P0C870 316 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 PNRC1Q12796 327 aaPredicted RBP8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 POMZP3Q6PJE2 187 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 OR5D14Q8NGL3 314 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 NT5CQ8TCD5 201 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 CTHRC1Q96CG8 243 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 SPACA7Q96KW9 195 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 CACNA1IQ9P0X4 2223 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 SIAH2O43255 324 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 HSPA12AO43301 675 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 IRF2P14316 349 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 CTLA4P16410 223 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 IDH3GP51553 393 aaPredicted RBP8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 SGCGQ13326 291 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 OR5I1Q13606 314 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 ZNF266Q14584 549 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 P2RY6Q15077 328 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 COA6Q5JTJ3 125 aaKnown RBP8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 FBXO42Q6P3S6 717 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 TMEM123Q8N131 208 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 NOXO1Q8NFA2 376 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 OR14L1PQ8NHC6 308 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 KCNG3Q8TAE7 436 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 SOCS4Q8WXH5 440 aa8.3□□□□□ -1.08
SYNPO2-204ENST00000448416 REEP6Q96HR9 211 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms