RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 CDKN1AP38936 164 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 OR3A2P47893 321 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 ZNF81P51508 661 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 B2MP61769 119 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 GLO1Q04760 184 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 TUSC1Q2TAM9 212 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 RNASE12Q5GAN4 147 aaKnown RBP6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 OR8H3Q8N146 312 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 MUC15Q8N387 334 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 STPG2Q8N412 459 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 SVIPQ8NHG7 77 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 POC1BQ8TC44 478 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 RNF128Q8TEB7 428 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 RBPMSQ93062 196 aaKnown RBP6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 CHST6Q9GZX3 395 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 ELOVL3Q9HB03 270 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 ANAPC10Q9UM13 185 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 ZNF835Q9Y2P0 537 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 FLVCR1Q9Y5Y0 555 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 FRYQ5TBA9 3013 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 FREM3P0C091 2139 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 PSMD9O00233 223 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 PPIHO43447 177 aaKnown RBP6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 H2AFB1P0C5Y9 115 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 CTRB1P17538 263 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 HLA-GP17693 338 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 GMFBP60983 142 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 RPL18Q07020 188 aaKnown RBP6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 ZNF718Q3SXZ3 478 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 WDR38Q5JTN6 314 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 TIMM23BQ5SRD1 257 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 CTRB2Q6GPI1 263 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 RTL6Q6ICC9 239 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 FAM220AQ7Z4H9 259 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 CCDC36Q8IYA8 594 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 MUC20Q8N307 709 aaPredicted RBP6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 FTMTQ8N4E7 242 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 PAQR4Q8N4S7 273 aaPredicted RBP6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 OTOSQ8NHW6 89 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 KCNK15Q9H427 330 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 FN3KRPQ9HA64 309 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 CLCF1Q9UBD9 225 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 STEAP1Q9UHE8 339 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 FZR1Q9UM11 496 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 ZNF724A8MTY0 619 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 ATP6V1G2-DDX39BF2Z307 99 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 H3BUI4 141 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 ZNF432O94892 652 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 PATE4P0C8F1 98 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 RAP2BP61225 183 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 SORDQ00796 357 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 SSBP1Q04837 148 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 BSPH1Q075Z2 132 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 Q71RC1 249 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 KRT77Q7Z794 578 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 CDH26Q8IXH8 852 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 RELL2Q8NC24 303 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 OR8S1Q8NH09 359 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 NRGNQ92686 78 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 SYT4Q9H2B2 425 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 HEATR1Q9H583 2144 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 C5orf49A4QMS7 147 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 M0R233 179 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 PDCD5O14737 125 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 IFNA7P01567 189 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 PRF1P14222 555 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 NFYAP23511 347 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 MAPK3P27361 379 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 CAPZA1P52907 286 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 SEC61A1P61619 476 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 CATSPERDQ86XM0 798 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 CPEB3Q8NE35 698 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 OR1J1Q8NGS3 322 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 FCAMRQ8WWV6 532 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 SPTSSAQ969W0 71 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 PHF21AQ96BD5 680 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 MNTQ99583 582 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 BEX1Q9HBH7 125 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 G6PC2Q9NQR9 355 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 COL27A1Q8IZC6 1860 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 USP9XQ93008 2570 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 C2CD3Q4AC94 2353 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 C19orf84I3L1E1 186 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 ETV2O00321 342 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 NDUFA2O43678 99 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 KDM4BO94953 1096 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 RPA2P15927 270 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 ANOS1P23352 680 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 RPL27P61353 136 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 ADAM8P78325 824 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 GUCA2AQ02747 115 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 RBMS3Q6XE24 437 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 OR13C8Q8NGS7 320 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 LILRB1Q8NHL6 650 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 ASB13Q8WXK3 278 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 SEH1LQ96EE3 360 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 PSMG3-AS1Q96PY0 264 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 NPAS1Q99742 590 aa6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 SYT3Q9BQG1 590 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms