RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 PRTN3P24158 256 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 TGM4P49221 684 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 GDI2P50395 445 aaKnown RBP4.04□□□□□ -1.76
PTPN4-206ENST00000441089 PRKXP51817 358 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 RIDAP52758 137 aaKnown RBP4.04□□□□□ -1.76
PTPN4-206ENST00000441089 GBX2P52951 348 aaPredicted RBP4.04□□□□□ -1.76
PTPN4-206ENST00000441089 SH3BGRP55822 239 aaPredicted RBP4.04□□□□□ -1.76
PTPN4-206ENST00000441089 ZNF121P58317 390 aaPredicted RBP4.04□□□□□ -1.76
PTPN4-206ENST00000441089 NCS1P62166 190 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 LSM3P62310 102 aaKnown RBP4.04□□□□□ -1.76
PTPN4-206ENST00000441089 FABP5Q01469 135 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 SLC3A1Q07837 685 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 ALKBH1Q13686 389 aaKnown RBP4.04□□□□□ -1.76
PTPN4-206ENST00000441089 CARTPTQ16568 116 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 BEAN1Q3B7T3 259 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 PABPC1L2AQ5JQF8 200 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 KPRPQ5T749 579 aaPredicted RBP4.04□□□□□ -1.76
PTPN4-206ENST00000441089 RUSC1-AS1Q66K80 236 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 ZNF544Q6NX49 715 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 RPL22L1Q6P5R6 122 aaKnown RBP4.04□□□□□ -1.76
PTPN4-206ENST00000441089 KCTD18Q6PI47 426 aaPredicted RBP4.04□□□□□ -1.76
PTPN4-206ENST00000441089 CD200R1LQ6Q8B3 271 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 DEGS2Q6QHC5 323 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 TMEM91Q6ZNR0 172 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 C17orf107Q6ZR85 190 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 BHLHA15Q7RTS1 189 aaPredicted RBP4.04□□□□□ -1.76
PTPN4-206ENST00000441089 FAM220AQ7Z4H9 259 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 ABHD12BQ7Z5M8 362 aaPredicted RBP4.04□□□□□ -1.76
PTPN4-206ENST00000441089 KCTD20Q7Z5Y7 419 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 MDP1Q86V88 176 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 CATSPERDQ86XM0 798 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 RDH10Q8IZV5 341 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 PAQR4Q8N4S7 273 aaPredicted RBP4.04□□□□□ -1.76
PTPN4-206ENST00000441089 C1orf162Q8NEQ5 155 aaPredicted RBP4.04□□□□□ -1.76
PTPN4-206ENST00000441089 GJC3Q8NFK1 279 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 OR51A4Q8NGJ6 313 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 OR2AJ1Q8NGZ0 328 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 OR1F12Q8NHA8 337 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 GTF3AQ92664 365 aaKnown RBP4.04□□□□□ -1.76
PTPN4-206ENST00000441089 TMEM203Q969S6 136 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 TMEM186Q96B77 213 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 S100PBPQ96BU1 408 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 C12orf43Q96C57 262 aaKnown RBP4.04□□□□□ -1.76
PTPN4-206ENST00000441089 ISOC1Q96CN7 298 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 SMIM19Q96E16 107 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 POM121L2Q96KW2 1035 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 LYZL4Q96KX0 146 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 DOK1Q99704 481 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 COQ7Q99807 217 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 ATF6BQ99941 703 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 CENPOQ9BU64 300 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 TMED9Q9BVK6 235 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 MROQ9BYG7 248 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 BPESC1Q9GZL8 116 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 PPIL3Q9H2H8 161 aaKnown RBP4.04□□□□□ -1.76
PTPN4-206ENST00000441089 ZMAT4Q9H898 229 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 VCX3AQ9NNX9 186 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 ESM1Q9NQ30 184 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 TRIM36Q9NQ86 728 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 SLC17A5Q9NRA2 495 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 NDUFB11Q9NX14 153 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 PLEK2Q9NYT0 353 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 POU2F3Q9UKI9 436 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 TIMM10BQ9Y5J6 103 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 SLC25A15Q9Y619 301 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 R4GMQ9 66 aa4.04□□□□□ -1.76
PTPN4-206ENST00000441089 PCLOQ9Y6V0 5065 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 RYR2Q92736 4967 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 TRBV2A0A0J9YWF9 115 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 TRBV5-5A0A0J9YX44 114 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 A0A1B0GTI1 187 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 TMEM269A0A1B0GVZ9 245 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 CIB4A0PJX0 185 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 UBE2QL1A1L167 161 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 LRP5LA4QPB2 252 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 DPRXA6NFQ7 191 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 OR5H1A6NKK0 313 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 F5H5K5 113 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 H3BMQ9 156 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 H3BSH0 61 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 GABRPO00591 440 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 ABCD4O14678 606 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 AIREO43918 545 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 LY6HO94772 140 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 UBL3O95164 117 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 FARS2O95363 451 aaKnown RBP4.03□□□□□ -1.76
PTPN4-206ENST00000441089 IGLV3-1P01715 115 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 TTRP02766 147 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 CLEC2LP0C7M8 214 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 COX5BP10606 129 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 CCL2P13500 99 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 ZNF14P17017 642 aaPredicted RBP4.03□□□□□ -1.76
PTPN4-206ENST00000441089 CD40P25942 277 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 GIFP27352 417 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 GABRA5P31644 462 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 DCTDP32321 178 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 GUCA1AP43080 201 aaPredicted RBP4.03□□□□□ -1.76
PTPN4-206ENST00000441089 CAPZA2P47755 286 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 HTR5AP47898 357 aa4.03□□□□□ -1.76
PTPN4-206ENST00000441089 CX3CR1P49238 355 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms