RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 FAM107BQ9H098 131 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 OR51I2Q9H344 312 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 ARL8BQ9NVJ2 186 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 MPC1Q9Y5U8 109 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 A0A1W2PRX2 142 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 RFPL4AA6NLU0 287 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 TMEM210A6NLX4 147 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 RIIAD1A6NNX1 92 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 RFPL4AL1F8VTS6 287 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 SYNGR1O43759 233 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 KRT36O76013 467 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 GLCEO94923 617 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 PIPP12273 146 aaPredicted RBP6.55□□□□□ -1.36
VIM-202ENST00000421459 IGLL1P15814 213 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 ZNF273Q14593 569 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 TMEM95Q3KNT9 176 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 FOXB2Q5VYV0 432 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 C11orf87Q6NUJ2 197 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 RPL13AP3Q6NVV1 102 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 MOB3CQ70IA8 216 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.55□□□□□ -1.36
VIM-202ENST00000421459 ZDHHC23Q8IYP9 409 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 CCDC197Q8NCU1 140 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 BBS1Q8NFJ9 593 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 OR52H1Q8NGJ2 320 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 AQP3Q92482 292 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 PHF21AQ96BD5 680 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 DMRTB1Q96MA1 342 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 FAM234AQ9H0X4 552 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 DNTTIP1Q9H147 329 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 CMC2Q9NRP2 79 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 ARL2BPQ9Y2Y0 163 aa6.55□□□□□ -1.36
VIM-202ENST00000421459 TET2Q6N021 2002 aaPredicted RBP6.55□□□□□ -1.36
VIM-202ENST00000421459 COL7A1Q02388 2944 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 TCRBV5S2A0A599 114 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 A6NIN4 97 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 PRR32B1ATL7 298 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 FBXO24O75426 580 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 MPIG6BO95866 241 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 IFNGP01579 166 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 LYNP07948 512 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 VSIG8P0DPA2 414 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 CFL1P23528 166 aaKnown RBP6.54□□□□□ -1.36
VIM-202ENST00000421459 PRDX6P30041 224 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 PRDX2P32119 198 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 RPL31P62899 125 aaKnown RBP6.54□□□□□ -1.36
VIM-202ENST00000421459 BLCAPP62952 87 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 MICAQ29983 383 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 CEACAM21Q3KPI0 293 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 SAMD4BQ5PRF9 694 aaKnown RBP6.54□□□□□ -1.36
VIM-202ENST00000421459 PLBD1Q6P4A8 553 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 HAGHLQ6PII5 290 aaPredicted RBP6.54□□□□□ -1.36
VIM-202ENST00000421459 SHFQ7M4L6 423 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 THAP5Q7Z6K1 395 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 TMEM179BQ7Z7N9 219 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 DEFB107AQ8IZN7 70 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 PGAM4Q8N0Y7 254 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 OR5D13Q8NGL4 314 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 OR2T27Q8NH04 317 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 OTOSQ8NHW6 89 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 SDSLQ96GA7 329 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 HIST1H2AAQ96QV6 131 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 CDCA4Q9BXL8 241 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 TTTY10Q9BZA0 68 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 NPFFR1Q9GZQ6 430 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 NECAP2Q9NVZ3 263 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 LRP12Q9Y561 859 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 RYR2Q92736 4967 aa6.54□□□□□ -1.36
VIM-202ENST00000421459 TRBV23-1A0A0A0MS06 115 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 A6NDX4 124 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 MAGEB4O15481 346 aaPredicted RBP6.53□□□□□ -1.36
VIM-202ENST00000421459 MTRF1O75570 445 aaKnown RBP6.53□□□□□ -1.36
VIM-202ENST00000421459 INMTO95050 263 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 APOC1P02654 83 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 MRPL3P09001 348 aaKnown RBP6.53□□□□□ -1.36
VIM-202ENST00000421459 FAHP16930 419 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 ZNF3P17036 446 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 MAGEA2P43356 314 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 DLX6P56179 175 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 LGALS4P56470 323 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 GNG3P63215 75 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 MS4A2Q01362 244 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 SSX2Q16385 188 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 TMEM236Q5W0B7 351 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 PLCXD3Q63HM9 321 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 ACP7Q6ZNF0 438 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 REC114Q7Z4M0 266 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 OR10G2Q8NGC3 310 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 FAM81AQ8TBF8 368 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 OR51E1Q8TCB6 317 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 WIPF2Q8TF74 440 aaPredicted RBP6.53□□□□□ -1.36
VIM-202ENST00000421459 FEVQ99581 238 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 TEAD3Q99594 435 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 DGCR6LQ9BY27 220 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 RGCCQ9H4X1 137 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 RANBP3Q9H6Z4 567 aaPredicted RBP6.53□□□□□ -1.36
VIM-202ENST00000421459 NIPAL2Q9H841 368 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 HEXA-AS1Q9H8Q6 139 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 GPR173Q9NS66 373 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 FAM206AQ9NX38 181 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms