RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 TSPO2Q5TGU0 170 aa11.82□□□□□ -0.52
LIMS1-205ENST00000410093 C11orf88Q6PI97 169 aa11.82□□□□□ -0.52
LIMS1-205ENST00000410093 COLCA1Q6ZS62 124 aa11.82□□□□□ -0.52
LIMS1-205ENST00000410093 HOGA1Q86XE5 327 aa11.82□□□□□ -0.52
LIMS1-205ENST00000410093 FTMTQ8N4E7 242 aa11.82□□□□□ -0.52
LIMS1-205ENST00000410093 ZSCAN4Q8NAM6 433 aaPredicted RBP11.82□□□□□ -0.52
LIMS1-205ENST00000410093 TMEM104Q8NE00 496 aa11.82□□□□□ -0.52
LIMS1-205ENST00000410093 TERB2Q8NHR7 220 aa11.82□□□□□ -0.52
LIMS1-205ENST00000410093 APH1AQ96BI3 265 aa11.82□□□□□ -0.52
LIMS1-205ENST00000410093 NKX3-1Q99801 234 aaPredicted RBP11.82□□□□□ -0.52
LIMS1-205ENST00000410093 A0A0A6YYD4 124 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 ZNF816-ZNF321PA0A0X1KG74 233 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 G3V3Q6 166 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 SOCS1O15524 211 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 NRASP01111 189 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 CSTBP04080 98 aaKnown RBP11.81□□□□□ -0.52
LIMS1-205ENST00000410093 HRH1P35367 487 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 ZNF81P51508 661 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 TMEM50BP56557 158 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 SNRPD2P62316 118 aaKnown RBP11.81□□□□□ -0.52
LIMS1-205ENST00000410093 PLAC9Q5JTB6 97 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 LYG2Q86SG7 212 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 OR8H1Q8NGG4 311 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 NUDCD2Q8WVJ2 157 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 ST8SIA4Q92187 359 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 PIGTQ969N2 578 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 ZNF775Q96BV0 537 aaPredicted RBP11.81□□□□□ -0.52
LIMS1-205ENST00000410093 BORCS8Q96FH0 119 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 PHB2Q99623 299 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 CHST6Q9GZX3 395 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 KCNN3Q9UGI6 736 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 DSPP15924 2871 aaKnown RBP11.81□□□□□ -0.52
LIMS1-205ENST00000410093 A0A0B4J2A0 478 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 hCG_38984A0A1B0GV85 526 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 CD8AP01732 235 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 LIPCP11150 499 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 BLVRBP30043 206 aaPredicted RBP11.81□□□□□ -0.52
LIMS1-205ENST00000410093 ARG2P78540 354 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 FAM3AP98173 230 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 MALLQ13021 153 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 DHRS2Q13268 280 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 RSU1Q15404 277 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 GRK1Q15835 563 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 PABPC1L2AQ5JQF8 200 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 CRIP3Q6Q6R5 217 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 TMEM185AQ8NFB2 350 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 OR5H2Q8NGV7 314 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 AKR7LQ8NHP1 331 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 MITD1Q8WV92 249 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 NANOS1Q8WY41 292 aaKnown RBP11.81□□□□□ -0.52
LIMS1-205ENST00000410093 CMBLQ96DG6 245 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 ARHGAP5-AS1Q96IT6 56 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 SPACA5Q96QH8 159 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 NICN1Q9BSH3 213 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 SLC6A15Q9H2J7 730 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 BANF2Q9H503 90 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 PRORYQ9H606 182 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 SLC7A10Q9NS82 523 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 CA10Q9NS85 328 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 PLA2G3Q9NZ20 509 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 SLC23A1Q9UHI7 598 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 SHPKQ9UHJ6 478 aa11.81□□□□□ -0.52
LIMS1-205ENST00000410093 TRGV5A0A0B4J1U4 118 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 FAM166BA8MTA8 275 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 J3QW42 95 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 L7N2F9 121 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 GOSR2O14653 212 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 DUS4LO95620 317 aaKnown RBP11.8□□□□□ -0.52
LIMS1-205ENST00000410093 TMEM225BP0DP42 221 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 ZBTB25P24278 435 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 CD34P28906 385 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 HTR2BP41595 481 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 OR3A3P47888 321 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 OR3A2P47893 321 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 SEC61A1P61619 476 aaKnown RBP11.8□□□□□ -0.52
LIMS1-205ENST00000410093 ARF1P84077 181 aaKnown RBP11.8□□□□□ -0.52
LIMS1-205ENST00000410093 PLP2Q04941 152 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 TMEM128Q5BJH2 165 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 ZNF766Q5HY98 468 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 TMEM65Q6PI78 240 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 TMED4Q7Z7H5 227 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 CD163Q86VB7 1156 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 CCDC36Q8IYA8 594 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 SAXO1Q8IYX7 474 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 ZNF680Q8NEM1 530 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 CSNK2A3Q8NEV1 391 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 OR4S1Q8NGB4 309 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 OR52B4Q8NGK2 314 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 OR5M8Q8NGP6 311 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 FBXW5Q969U6 566 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 APOBEC3DQ96AK3 386 aaPredicted RBP11.8□□□□□ -0.52
LIMS1-205ENST00000410093 Q96M66 194 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 DHRS9Q9BPW9 319 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 PECRQ9BY49 303 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 CHIAQ9BZP6 476 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 ZDHHC11Q9H8X9 412 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 MAB21L2Q9Y586 359 aa11.8□□□□□ -0.52
LIMS1-205ENST00000410093 FAM90A10PA6NDY2 464 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 FAM90A18PA6NE21 464 aa11.79□□□□□ -0.52
LIMS1-205ENST00000410093 FAM90A16PA6NEW6 464 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms