RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 C3orf36Q3SXR2 165 aa12.05□□□□□ -0.48
GPNMB-203ENST00000409458 CALHM1Q8IU99 346 aa12.05□□□□□ -0.48
GPNMB-203ENST00000409458 KLF14Q8TD94 323 aaPredicted RBP12.05□□□□□ -0.48
GPNMB-203ENST00000409458 ITPKCQ96DU7 683 aa12.05□□□□□ -0.48
GPNMB-203ENST00000409458 RNF170Q96K19 258 aa12.05□□□□□ -0.48
GPNMB-203ENST00000409458 FAIMQ9NVQ4 179 aa12.05□□□□□ -0.48
GPNMB-203ENST00000409458 MRPL15Q9P015 296 aaKnown RBP12.05□□□□□ -0.48
GPNMB-203ENST00000409458 KLK11Q9UBX7 282 aa12.05□□□□□ -0.48
GPNMB-203ENST00000409458 ELF5Q9UKW6 265 aaPredicted RBP12.05□□□□□ -0.48
GPNMB-203ENST00000409458 C16orf97H3BN30 126 aa12.04□□□□□ -0.48
GPNMB-203ENST00000409458 CA6P23280 308 aa12.04□□□□□ -0.48
GPNMB-203ENST00000409458 RAD52P43351 418 aa12.04□□□□□ -0.48
GPNMB-203ENST00000409458 RPS27AP62979 156 aaKnown RBP12.04□□□□□ -0.48
GPNMB-203ENST00000409458 PSG7Q13046 419 aa12.04□□□□□ -0.48
GPNMB-203ENST00000409458 PDZK1IP1Q13113 114 aa12.04□□□□□ -0.48
GPNMB-203ENST00000409458 GPR176Q14439 515 aa12.04□□□□□ -0.48
GPNMB-203ENST00000409458 RAB12Q6IQ22 244 aa12.04□□□□□ -0.48
GPNMB-203ENST00000409458 ASCL4Q6XD76 172 aa12.04□□□□□ -0.48
GPNMB-203ENST00000409458 CDH24Q86UP0 819 aa12.04□□□□□ -0.48
GPNMB-203ENST00000409458 GLCCI1Q86VQ1 547 aa12.04□□□□□ -0.48
GPNMB-203ENST00000409458 OR10R2Q8NGX6 335 aa12.04□□□□□ -0.48
GPNMB-203ENST00000409458 OR5P3Q8WZ94 311 aa12.04□□□□□ -0.48
GPNMB-203ENST00000409458 METTL9Q9H1A3 318 aa12.04□□□□□ -0.48
GPNMB-203ENST00000409458 RBFOX1Q9NWB1 397 aaKnown RBP12.04□□□□□ -0.48
GPNMB-203ENST00000409458 MPC1Q9Y5U8 109 aa12.04□□□□□ -0.48
GPNMB-203ENST00000409458 CACNG2Q9Y698 323 aa12.04□□□□□ -0.48
GPNMB-203ENST00000409458 MEIS3P1A6NDR6 274 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 TMEM235A6NFC5 223 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 IQCF6A8MYZ5 107 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 ZNF732B4DXR9 585 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 CCL21O00585 134 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 SOCS1O15524 211 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 SCGNO76038 276 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 BTCP35070 178 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 KIR2DL3P43628 341 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 RSU1Q15404 277 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 IGFBP7Q16270 282 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 ZNF260Q3ZCT1 412 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 UNQ6126/PRO20091Q6UXV3 157 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 CELF2-AS1Q8N7Q2 184 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 CHST4Q8NCG5 386 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 AQP3Q92482 292 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 CYYR1Q96J86 154 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 NUDT16L1Q9BRJ7 211 aaKnown RBP12.03□□□□□ -0.48
GPNMB-203ENST00000409458 BCL2L14Q9BZR8 327 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 SELENOIQ9C0D9 397 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 FZR1Q9UM11 496 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 PKD1L2Q7Z442 2459 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 HTR3BO95264 441 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 GNB3P16520 340 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 SELEP16581 610 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 PRSS3P35030 304 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 HAAOP46952 286 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 PLAC9Q5JTB6 97 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 C1QTNF12Q5T7M4 302 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 MZT2BQ6NZ67 158 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 Q6ZTK2 550 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 SLC25A26Q70HW3 274 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 ZNF611Q8N823 705 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 PXT1Q8NFP0 134 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 OR5A2Q8NGI9 324 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 OR51T1Q8NGJ9 327 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 ENKURQ8TC29 256 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 GPX8Q8TED1 209 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 ZC3HAV1LQ96H79 300 aaKnown RBP12.03□□□□□ -0.48
GPNMB-203ENST00000409458 HIST1H2AAQ96QV6 131 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 URM1Q9BTM9 101 aaKnown RBP12.03□□□□□ -0.48
GPNMB-203ENST00000409458 TM2D1Q9BX74 207 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 MMP28Q9H239 520 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 SPTA1P02549 2419 aa12.03□□□□□ -0.48
GPNMB-203ENST00000409458 FOXI3A8MTJ6 420 aaPredicted RBP12.02□□□□□ -0.49
GPNMB-203ENST00000409458 H7C417 338 aa12.02□□□□□ -0.49
GPNMB-203ENST00000409458 LPLP06858 475 aa12.02□□□□□ -0.49
GPNMB-203ENST00000409458 CHRM2P08172 466 aa12.02□□□□□ -0.49
GPNMB-203ENST00000409458 SNTB2Q13425 540 aaKnown RBP12.02□□□□□ -0.49
GPNMB-203ENST00000409458 CDNFQ49AH0 187 aa12.02□□□□□ -0.49
GPNMB-203ENST00000409458 FAM89BQ8N5H3 189 aa12.02□□□□□ -0.49
GPNMB-203ENST00000409458 OR56B1Q8NGI3 324 aa12.02□□□□□ -0.49
GPNMB-203ENST00000409458 SEH1LQ96EE3 360 aa12.02□□□□□ -0.49
GPNMB-203ENST00000409458 Q96M66 194 aa12.02□□□□□ -0.49
GPNMB-203ENST00000409458 ADAT1Q9BUB4 502 aaKnown RBP12.02□□□□□ -0.49
GPNMB-203ENST00000409458 IL36GQ9NZH8 169 aa12.02□□□□□ -0.49
GPNMB-203ENST00000409458 MTFP1Q9UDX5 166 aa12.02□□□□□ -0.49
GPNMB-203ENST00000409458 PURGQ9UJV8 347 aaKnown RBP12.02□□□□□ -0.49
GPNMB-203ENST00000409458 ANKRD20A5PA0PJZ0 165 aa12.01□□□□□ -0.49
GPNMB-203ENST00000409458 OR5B21A6NL26 309 aa12.01□□□□□ -0.49
GPNMB-203ENST00000409458 ATP6V1G2-DDX39BF2Z307 99 aa12.01□□□□□ -0.49
GPNMB-203ENST00000409458 SULT1C2O00338 296 aa12.01□□□□□ -0.49
GPNMB-203ENST00000409458 ECDO95905 644 aaPredicted RBP12.01□□□□□ -0.49
GPNMB-203ENST00000409458 CRYAAP02489 173 aa12.01□□□□□ -0.49
GPNMB-203ENST00000409458 MT-ND4P03905 459 aa12.01□□□□□ -0.49
GPNMB-203ENST00000409458 CSTBP04080 98 aaKnown RBP12.01□□□□□ -0.49
GPNMB-203ENST00000409458 THBDP07204 575 aa12.01□□□□□ -0.49
GPNMB-203ENST00000409458 SFTPBP07988 381 aa12.01□□□□□ -0.49
GPNMB-203ENST00000409458 TUBG1P23258 451 aa12.01□□□□□ -0.49
GPNMB-203ENST00000409458 TMEM50BP56557 158 aa12.01□□□□□ -0.49
GPNMB-203ENST00000409458 ADORA2A-AS1P86434 159 aa12.01□□□□□ -0.49
GPNMB-203ENST00000409458 MSMPQ1L6U9 139 aa12.01□□□□□ -0.49
GPNMB-203ENST00000409458 MBNL2Q5VZF2 373 aaKnown RBP12.01□□□□□ -0.49
GPNMB-203ENST00000409458 WDR86Q86TI4 376 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms