RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 MYBPHLA2RUH7 354 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 CLEC18AA5D8T8 446 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 C5orf51A6NDU8 294 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 C17orf100A8MU93 164 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 A8MXE2 369 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 CDRT15L2A8MXV6 281 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 TEX22C9J3V5 150 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 F5H5T6 163 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 I3L1I5 382 aaPredicted RBP4.8□□□□□ -1.64
CLK1-202ENST00000409403 DCTN6O00399 190 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 RTCAO00442 366 aaKnown RBP4.8□□□□□ -1.64
CLK1-202ENST00000409403 CYR61O00622 381 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 PHOX2AO14813 284 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 TSPAN2O60636 221 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 DUS4LO95620 317 aaKnown RBP4.8□□□□□ -1.64
CLK1-202ENST00000409403 CH25HO95992 272 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 CYB5AP00167 134 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 ZNF286BP0CG31 522 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 TBPP20226 339 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 FCARP24071 287 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 SNCAP37840 140 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 CDKN1BP46527 198 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 ERVFC1-1P60608 527 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 RPS23P62266 143 aaKnown RBP4.8□□□□□ -1.64
CLK1-202ENST00000409403 YPEL5P62699 121 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 RANP62826 216 aaKnown RBP4.8□□□□□ -1.64
CLK1-202ENST00000409403 MRPS11P82912 194 aaKnown RBP4.8□□□□□ -1.64
CLK1-202ENST00000409403 FAM3AP98173 230 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 GUK1Q16774 197 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 BEX5Q5H9J7 111 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 OR2T2Q6IF00 324 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 BTNL3Q6UXE8 466 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 CLEC18BQ6UXF7 455 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 FAM151BQ6UXP7 276 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 Q6ZRG5 221 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 COMMD6Q7Z4G1 85 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 P4HA3Q7Z4N8 544 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 C9orf40Q8IXQ3 194 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 TMEM183AQ8IXX5 376 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 DND1Q8IYX4 353 aaKnown RBP4.8□□□□□ -1.64
CLK1-202ENST00000409403 C1orf87Q8N0U7 546 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 KDM8Q8N371 416 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 ARL14Q8N4G2 192 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 ZNF433Q8N7K0 673 aaPredicted RBP4.8□□□□□ -1.64
CLK1-202ENST00000409403 SUMF2Q8NBJ7 301 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 CLEC1AQ8NC01 280 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 CLEC18CQ8NCF0 446 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 FIBINQ8TAL6 211 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 OSR1Q8TAX0 266 aaPredicted RBP4.8□□□□□ -1.64
CLK1-202ENST00000409403 NUBPLQ8TB37 319 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 LKAAEAR1Q8TD35 194 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 MRGPRDQ8TDS7 321 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 ADAMTS15Q8TE58 950 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 SKA2Q8WVK7 121 aaPredicted RBP4.8□□□□□ -1.64
CLK1-202ENST00000409403 SECTM1Q8WVN6 248 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 CORO2AQ92828 525 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 FGF14Q92915 247 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 MUCL1Q96DR8 90 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 CNN2Q99439 309 aaKnown RBP4.8□□□□□ -1.64
CLK1-202ENST00000409403 TBX5Q99593 518 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 GPA33Q99795 319 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 ARHGDIGQ99819 225 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 SELENOIQ9C0D9 397 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 SLC25A31Q9H0C2 315 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 Q9N2J8 555 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 BPIFA1Q9NP55 256 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 NOX4Q9NPH5 578 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 DKKL1Q9UK85 242 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 MOKQ9UQ07 419 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 SCML2Q9UQR0 700 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 A0A1W2PPE2 198 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 ANTXRLA6NF34 631 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 FAM183AA6NL82 134 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 HMGN4O00479 90 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 TLX3O43711 291 aaPredicted RBP4.79□□□□□ -1.64
CLK1-202ENST00000409403 HIST1H2BKO60814 126 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 RPP14O95059 124 aaKnown RBP4.79□□□□□ -1.64
CLK1-202ENST00000409403 PPP1R3DO95685 299 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 IGLV2-14P01704 120 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 CATP04040 527 aaKnown RBP4.79□□□□□ -1.64
CLK1-202ENST00000409403 HIST1H2BJP06899 126 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 GALTP07902 379 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 GUSBP08236 651 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 TACSTD2P09758 323 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 THEGLP0DJG4 465 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 HNF1AP20823 631 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 HIST1H2BOP23527 126 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 ZBTB25P24278 435 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 HOXA11P31270 313 aaPredicted RBP4.79□□□□□ -1.64
CLK1-202ENST00000409403 HIST1H2BBP33778 126 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 OPRD1P41143 372 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 AQP2P41181 271 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 AKR1C3P42330 323 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 LPAR6P43657 344 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 OR3A1P47881 315 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 CXCL12P48061 93 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 ARRB1P49407 418 aaPredicted RBP4.79□□□□□ -1.64
CLK1-202ENST00000409403 CASP9P55211 416 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 UCP2P55851 309 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 CLDN12P56749 244 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms