RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 MUC20Q8N307 709 aaPredicted RBP21.35■■□□□ 1.01
DNMT3A-206ENST00000406659 UXS1Q8NBZ7 420 aa21.35■■□□□ 1.01
DNMT3A-206ENST00000406659 OR2T35Q8NGX2 323 aa21.35■■□□□ 1.01
DNMT3A-206ENST00000406659 SNAPC3Q92966 411 aa21.35■■□□□ 1.01
DNMT3A-206ENST00000406659 POM121L2Q96KW2 1035 aa21.35■■□□□ 1.01
DNMT3A-206ENST00000406659 Q96M66 194 aa21.35■■□□□ 1.01
DNMT3A-206ENST00000406659 REPIN1Q9BWE0 567 aaKnown RBP21.35■■□□□ 1.01
DNMT3A-206ENST00000406659 MYOZ1Q9NP98 299 aaPredicted RBP21.35■■□□□ 1.01
DNMT3A-206ENST00000406659 ZNHIT1O43257 154 aa21.34■■□□□ 1.01
DNMT3A-206ENST00000406659 GABRR1P24046 479 aa21.34■■□□□ 1.01
DNMT3A-206ENST00000406659 GK2Q14410 553 aaPredicted RBP21.34■■□□□ 1.01
DNMT3A-206ENST00000406659 ACTBL2Q562R1 376 aa21.34■■□□□ 1.01
DNMT3A-206ENST00000406659 RTL6Q6ICC9 239 aa21.34■■□□□ 1.01
DNMT3A-206ENST00000406659 ASCL4Q6XD76 172 aa21.34■■□□□ 1.01
DNMT3A-206ENST00000406659 C9orf62Q8N4C0 152 aa21.34■■□□□ 1.01
DNMT3A-206ENST00000406659 GON7Q9BXV9 100 aa21.34■■□□□ 1.01
DNMT3A-206ENST00000406659 CA10Q9NS85 328 aa21.34■■□□□ 1.01
DNMT3A-206ENST00000406659 ZFHX2Q9C0A1 2572 aaPredicted RBP21.34■■□□□ 1.01
DNMT3A-206ENST00000406659 ZNF850A8MQ14 1090 aa21.33■■□□□ 1.01
DNMT3A-206ENST00000406659 SERPINE3A8MV23 424 aa21.33■■□□□ 1.01
DNMT3A-206ENST00000406659 ZNF780AO75290 641 aaPredicted RBP21.33■■□□□ 1.01
DNMT3A-206ENST00000406659 SERPINA5P05154 406 aa21.33■■□□□ 1.01
DNMT3A-206ENST00000406659 GIPP09681 153 aaPredicted RBP21.33■■□□□ 1.01
DNMT3A-206ENST00000406659 OR4E1P0C645 316 aa21.33■■□□□ 1.01
DNMT3A-206ENST00000406659 SNRPD2P62316 118 aaKnown RBP21.33■■□□□ 1.01
DNMT3A-206ENST00000406659 OR56B2PQ8NGI1 322 aa21.33■■□□□ 1.01
DNMT3A-206ENST00000406659 SARAFQ96BY9 339 aa21.33■■□□□ 1.01
DNMT3A-206ENST00000406659 STARD10Q9Y365 291 aa21.33■■□□□ 1.01
DNMT3A-206ENST00000406659 OR11H4Q8NGC9 324 aa21.33■■□□□ 1
DNMT3A-206ENST00000406659 ST8SIA4Q92187 359 aa21.33■■□□□ 1
DNMT3A-206ENST00000406659 FBXW5Q969U6 566 aa21.33■■□□□ 1
DNMT3A-206ENST00000406659 WISP2O76076 250 aa21.32■■□□□ 1
DNMT3A-206ENST00000406659 AMY2BP19961 511 aa21.32■■□□□ 1
DNMT3A-206ENST00000406659 RAP2BP61225 183 aa21.32■■□□□ 1
DNMT3A-206ENST00000406659 PDZK1IP1Q13113 114 aa21.32■■□□□ 1
DNMT3A-206ENST00000406659 PPA1Q15181 289 aa21.32■■□□□ 1
DNMT3A-206ENST00000406659 MICBQ29980 383 aa21.32■■□□□ 1
DNMT3A-206ENST00000406659 ZDHHC22Q8N966 263 aa21.32■■□□□ 1
DNMT3A-206ENST00000406659 OR2AK2Q8NG84 335 aa21.32■■□□□ 1
DNMT3A-206ENST00000406659 ST6GALNAC5Q9BVH7 336 aa21.32■■□□□ 1
DNMT3A-206ENST00000406659 PLEKHJ1Q9NW61 149 aa21.32■■□□□ 1
DNMT3A-206ENST00000406659 VSIG4Q9Y279 399 aa21.32■■□□□ 1
DNMT3A-206ENST00000406659 RIF1Q5UIP0 2472 aaKnown RBP21.32■■□□□ 1
DNMT3A-206ENST00000406659 EFSO43281 561 aa21.31■■□□□ 1
DNMT3A-206ENST00000406659 CA11O75493 328 aa21.31■■□□□ 1
DNMT3A-206ENST00000406659 NDUFA5Q16718 116 aa21.31■■□□□ 1
DNMT3A-206ENST00000406659 GCNT2Q8N0V5 402 aa21.31■■□□□ 1
DNMT3A-206ENST00000406659 PXT1Q8NFP0 134 aa21.31■■□□□ 1
DNMT3A-206ENST00000406659 OR5M9Q8NGP3 310 aa21.31■■□□□ 1
DNMT3A-206ENST00000406659 PAPOLGQ9BWT3 736 aaKnown RBP21.31■■□□□ 1
DNMT3A-206ENST00000406659 PCDHB16Q9NRJ7 776 aa21.31■■□□□ 1
DNMT3A-206ENST00000406659 PIPOXQ9P0Z9 390 aa21.31■■□□□ 1
DNMT3A-206ENST00000406659 DMXL1Q9Y485 3027 aa21.31■■□□□ 1
DNMT3A-206ENST00000406659 OR2A4O95047 310 aa21.31■■□□□ 1
DNMT3A-206ENST00000406659 HLXQ14774 488 aaPredicted RBP21.31■■□□□ 1
DNMT3A-206ENST00000406659 ZNF169Q14929 603 aaPredicted RBP21.31■■□□□ 1
DNMT3A-206ENST00000406659 NKAPLQ5M9Q1 402 aa21.31■■□□□ 1
DNMT3A-206ENST00000406659 MDP1Q86V88 176 aa21.31■■□□□ 1
DNMT3A-206ENST00000406659 HOGA1Q86XE5 327 aa21.31■■□□□ 1
DNMT3A-206ENST00000406659 OR5H2Q8NGV7 314 aa21.31■■□□□ 1
DNMT3A-206ENST00000406659 GRPEL2Q8TAA5 225 aa21.31■■□□□ 1
DNMT3A-206ENST00000406659 CYYR1Q96J86 154 aa21.31■■□□□ 1
DNMT3A-206ENST00000406659 OR2A7Q96R45 310 aa21.31■■□□□ 1
DNMT3A-206ENST00000406659 OPA3Q9H6K4 179 aa21.31■■□□□ 1
DNMT3A-206ENST00000406659 GPR160Q9UJ42 338 aa21.31■■□□□ 1
DNMT3A-206ENST00000406659 TNRC6AQ8NDV7 1962 aaKnown RBP21.3■■□□□ 1
DNMT3A-206ENST00000406659 MED12LQ86YW9 2145 aa21.3■■□□□ 1
DNMT3A-206ENST00000406659 NGFP01138 241 aa21.3■■□□□ 1
DNMT3A-206ENST00000406659 UBE2MP61081 183 aaKnown RBP21.3■■□□□ 1
DNMT3A-206ENST00000406659 TGFBR3Q03167 851 aa21.3■■□□□ 1
DNMT3A-206ENST00000406659 VAX1Q5SQQ9 334 aa21.3■■□□□ 1
DNMT3A-206ENST00000406659 TFAP2EQ6VUC0 442 aa21.3■■□□□ 1
DNMT3A-206ENST00000406659 FAM214BQ7L5A3 538 aa21.3■■□□□ 1
DNMT3A-206ENST00000406659 C6orf201Q7Z4U5 140 aa21.3■■□□□ 1
DNMT3A-206ENST00000406659 C12orf45Q8N5I9 185 aaPredicted RBP21.3■■□□□ 1
DNMT3A-206ENST00000406659 NAXEQ8NCW5 288 aa21.3■■□□□ 1
DNMT3A-206ENST00000406659 CSNK2A3Q8NEV1 391 aa21.3■■□□□ 1
DNMT3A-206ENST00000406659 IL36GQ9NZH8 169 aa21.3■■□□□ 1
DNMT3A-206ENST00000406659 URB1O60287 2271 aaKnown RBP21.3■■□□□ 1
DNMT3A-206ENST00000406659 H3BUI4 141 aa21.29■■□□□ 1
DNMT3A-206ENST00000406659 GOSR2O14653 212 aa21.29■■□□□ 1
DNMT3A-206ENST00000406659 GSTT2P0CG29 244 aa21.29■■□□□ 1
DNMT3A-206ENST00000406659 PRDX4Q13162 271 aa21.29■■□□□ 1
DNMT3A-206ENST00000406659 ASCL5Q7RTU5 278 aa21.29■■□□□ 1
DNMT3A-206ENST00000406659 SLC25A42Q86VD7 318 aa21.29■■□□□ 1
DNMT3A-206ENST00000406659 OR51F2Q8NH61 342 aa21.29■■□□□ 1
DNMT3A-206ENST00000406659 FAM186AA6NE01 2351 aa21.29■■□□□ 1
DNMT3A-206ENST00000406659 IGKV1-12A0A0C4DH73 117 aa21.28■■□□□ 1
DNMT3A-206ENST00000406659 OR2AT4A6NND4 320 aa21.28■■□□□ 1
DNMT3A-206ENST00000406659 KLK10O43240 276 aa21.28■■□□□ 1
DNMT3A-206ENST00000406659 TOXO94900 526 aa21.28■■□□□ 1
DNMT3A-206ENST00000406659 IGKV1D-12P01611 117 aa21.28■■□□□ 1
DNMT3A-206ENST00000406659 OR3A3P47888 321 aa21.28■■□□□ 1
DNMT3A-206ENST00000406659 SNU13P55769 128 aaKnown RBP21.28■■□□□ 1
DNMT3A-206ENST00000406659 TAS2R46P59540 309 aa21.28■■□□□ 1
DNMT3A-206ENST00000406659 TAF9Q16594 264 aa21.28■■□□□ 1
DNMT3A-206ENST00000406659 C17orf107Q6ZR85 190 aa21.28■■□□□ 1
DNMT3A-206ENST00000406659 OSR2Q8N2R0 312 aa21.28■■□□□ 1
DNMT3A-206ENST00000406659 ARRDC1Q8N5I2 433 aa21.28■■□□□ 1
DNMT3A-206ENST00000406659 MRGPRFQ96AM1 343 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms