RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 ADAM10O14672 748 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 RAMP1O60894 148 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 SNRNP70P08621 437 aaKnown RBP4.37□□□□□ -1.71
SMAD4-202ENST00000398417 DBHP09172 617 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 GLB1P16278 677 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 RPL7P18124 248 aaKnown RBP4.37□□□□□ -1.71
SMAD4-202ENST00000398417 CAMLGP49069 296 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF415Q09FC8 603 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 STK11Q15831 433 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 CLEC1AQ8NC01 280 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 ST8SIA1Q92185 356 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 ARHGAP5-AS1Q96IT6 56 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 OOEPA6NGQ2 149 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 GPR37O15354 613 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 CDC14BO60729 498 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 AQP8O94778 261 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 CPN1P15169 458 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 HNF1AP20823 631 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 EPHA1P21709 976 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 CFHR1Q03591 330 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 NAXDQ8IW45 347 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 KCNRGQ8N5I3 272 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 OR8B12Q8NGG6 310 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 OR2AE1Q8NHA4 323 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 MCHR2Q969V1 340 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 MFRPQ9BY79 579 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 AAMDCQ9H7C9 122 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 RETNQ9HD89 108 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 PIGLQ9Y2B2 252 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 WDR90Q96KV7 1748 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 THADAQ6YHU6 1953 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 A0A1W2PPH5 198 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 PLSCR5A0PG75 271 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 CRYM-AS1A6NIL9 109 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 CHEK1O14757 476 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 TOX3O15405 576 aaPredicted RBP4.37□□□□□ -1.71
SMAD4-202ENST00000398417 EFNA2O43921 213 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 RRASP10301 218 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 SRFP11831 508 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 TPT1P13693 172 aaKnown RBP4.37□□□□□ -1.71
SMAD4-202ENST00000398417 HIST1H1DP16402 221 aaKnown RBP4.37□□□□□ -1.71
SMAD4-202ENST00000398417 HTR5AP47898 357 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 HERV-K104P61576 105 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 EIF5AP63241 154 aaKnown RBP4.37□□□□□ -1.71
SMAD4-202ENST00000398417 SLC35A1P78382 337 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 SLC10A1Q14973 349 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 FIP1L1Q6UN15 594 aaKnown RBP4.37□□□□□ -1.71
SMAD4-202ENST00000398417 C11orf44Q8N8P7 122 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 POC1BQ8TC44 478 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 NKX6-2Q9C056 277 aaPredicted RBP4.37□□□□□ -1.71
SMAD4-202ENST00000398417 OR51B6Q9H340 312 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 FRYLO94915 3013 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 A6NLC8 198 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 TTLL8A6PVC2 850 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 OR2F2O95006 317 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 CHRM2P08172 466 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 FAHP16930 419 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 OR2F1Q13607 317 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 NKAIN3Q8N8D7 197 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 OR13C8Q8NGS7 320 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 RNF133Q8WVZ7 376 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 MRPL24Q96A35 216 aaKnown RBP4.36□□□□□ -1.71
SMAD4-202ENST00000398417 MVB12AQ96EY5 273 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 TMPRSS13Q9BYE2 586 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 UFSP2Q9NUQ7 469 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 TMEM200CA6NKL6 621 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 GPR31O00270 319 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF735P0CB33 412 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 HSD17B13Q7Z5P4 300 aaPredicted RBP4.36□□□□□ -1.71
SMAD4-202ENST00000398417 ZFP82Q8N141 532 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 DYRK2Q92630 601 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 SLC25A28Q96A46 364 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 SMIM12Q96EX1 92 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 MRGPRX4Q96LA9 322 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 HDHD3Q9BSH5 251 aaPredicted RBP4.36□□□□□ -1.71
SMAD4-202ENST00000398417 TNFSF18Q9UNG2 199 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 MED19A0JLT2 244 aaPredicted RBP4.36□□□□□ -1.71
SMAD4-202ENST00000398417 KRBOX1C9JBD0 128 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 GDF9O60383 454 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 IGKV3-11P04433 115 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 ZBTB25P24278 435 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 FOLR3P41439 243 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 FASLGP48023 281 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 ZP4Q12836 540 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 LEMD1Q68G75 181 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 WDFY1Q8IWB7 410 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 OR51F2Q8NH61 342 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 C2orf50Q96LR7 162 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF385AQ96PM9 386 aaKnown RBP4.36□□□□□ -1.71
SMAD4-202ENST00000398417 SLC25A21Q9BQT8 299 aaPredicted RBP4.36□□□□□ -1.71
SMAD4-202ENST00000398417 PECRQ9BY49 303 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 SLC17A5Q9NRA2 495 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 PPP1R3CQ9UQK1 317 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 B3GALT5Q9Y2C3 310 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 SCO2A0A1W2PP80 73 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 LMO7DNF2Z398 122 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 H7C2Y5 167 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 SGCEO43556 437 aa4.36□□□□□ -1.71
SMAD4-202ENST00000398417 TRAF3IP2O43734 574 aaPredicted RBP4.36□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF728P0DKX0 622 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms