RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 THAP10Q9P2Z0 257 aaPredicted RBP12.57□□□□□ -0.4
COL4A3-202ENST00000396578 NAGKQ9UJ70 344 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 MMP24Q9Y5R2 645 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 FRG2CA6NGY1 282 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 F11P03951 625 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 LBX1P52954 281 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 RPL24P83731 157 aaKnown RBP12.57□□□□□ -0.4
COL4A3-202ENST00000396578 DPTQ07507 201 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 VASH2Q86V25 355 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 WFDC8Q8IUA0 241 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 TGIF2LXQ8IUE1 241 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 SEBOXQ9HB31 216 aaPredicted RBP12.57□□□□□ -0.4
COL4A3-202ENST00000396578 RHOBP62745 196 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 SLC38A11Q08AI6 406 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 OPN1MWP04001 364 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 SP1P08047 785 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 OPN1MW2P0DN77 364 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 OPN1MW3P0DN78 364 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 B4GALT1P15291 398 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 CDC34P49427 236 aaPredicted RBP12.57□□□□□ -0.4
COL4A3-202ENST00000396578 ANKLE1Q8NAG6 615 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 BAHD1Q8TBE0 780 aaPredicted RBP12.57□□□□□ -0.4
COL4A3-202ENST00000396578 ANAPC16Q96DE5 110 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 TAAR3PQ9P1P4 343 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 ELOA3CA0A087WX78 387 aaPredicted RBP12.57□□□□□ -0.4
COL4A3-202ENST00000396578 AQP6Q13520 282 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 LRP12Q9Y561 859 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 FOCADQ5VW36 1801 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 DUXBA0A1W2PPF3 345 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 LSM11P83369 360 aaKnown RBP eCLIP12.57□□□□□ -0.4
COL4A3-202ENST00000396578 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.57□□□□□ -0.4
COL4A3-202ENST00000396578 ONECUT1Q9UBC0 465 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 TRAPPC4Q9Y296 219 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 CRXO43186 299 aaPredicted RBP12.56□□□□□ -0.4
COL4A3-202ENST00000396578 ST3GAL2Q16842 350 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 RGS7BPQ6MZT1 257 aaPredicted RBP12.56□□□□□ -0.4
COL4A3-202ENST00000396578 ATG101Q9BSB4 218 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 TOPAZ1Q8N9V7 1692 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 ZNF716A6NP11 495 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 KLKB1P03952 638 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 NAT1P18440 290 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 FUT3P21217 361 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 SLC6A12P48065 614 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 TIAL1Q01085 375 aaKnown RBP eCLIP12.56□□□□□ -0.4
COL4A3-202ENST00000396578 APOBEC3DQ96AK3 386 aaPredicted RBP12.56□□□□□ -0.4
COL4A3-202ENST00000396578 MYO16Q9Y6X6 1858 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 H3BVH4 76 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 M0R1X1 148 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 CEACAM6P40199 344 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 ALKBH6Q3KRA9 238 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 C19orf43Q9BQ61 176 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 IER2Q9BTL4 223 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 IL21Q9HBE4 155 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 FBXO4Q9UKT5 387 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 SVILO95425 2214 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 FIGNL2A6NMB9 653 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 MS4A18H0YCH9 400 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 SLC37A1P57057 533 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 CTF1Q16619 201 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 MS4A18Q3C1V0 323 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 KLHDC9Q8NEP7 349 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 ING1Q9UK53 422 aaPredicted RBP12.56□□□□□ -0.4
COL4A3-202ENST00000396578 TPRP12270 2363 aaKnown RBP12.56□□□□□ -0.4
COL4A3-202ENST00000396578 C9orf170A2RU37 121 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 TMPRSS11DO60235 418 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 BCL3P20749 454 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 GALP22466 123 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 B2MP61769 119 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 OR1N1Q8NGS0 311 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 RASL12Q9NYN1 266 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 PLCH1Q4KWH8 1693 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 PRSS36Q5K4E3 855 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 C20orf141Q9NUB4 165 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 B9D1Q9UPM9 204 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 WASHC3Q9Y3C0 194 aa12.56□□□□□ -0.4
COL4A3-202ENST00000396578 CHRNA7P36544 502 aa12.55□□□□□ -0.4
COL4A3-202ENST00000396578 MAP1LC3B2A6NCE7 125 aa12.55□□□□□ -0.4
COL4A3-202ENST00000396578 SEMA7AO75326 666 aa12.55□□□□□ -0.4
COL4A3-202ENST00000396578 RPS27P42677 84 aaKnown RBP12.55□□□□□ -0.4
COL4A3-202ENST00000396578 HERVK_113P61574 105 aa12.55□□□□□ -0.4
COL4A3-202ENST00000396578 DHRS2Q13268 280 aa12.55□□□□□ -0.4
COL4A3-202ENST00000396578 SP6Q3SY56 376 aa12.55□□□□□ -0.4
COL4A3-202ENST00000396578 SPSB1Q96BD6 273 aa12.55□□□□□ -0.4
COL4A3-202ENST00000396578 MAP1LC3BQ9GZQ8 125 aa12.55□□□□□ -0.4
COL4A3-202ENST00000396578 DOCK5Q9H7D0 1870 aa12.55□□□□□ -0.4
COL4A3-202ENST00000396578 A6NDN8 102 aa12.55□□□□□ -0.4
COL4A3-202ENST00000396578 PNLIPRP2P54317 469 aa12.55□□□□□ -0.4
COL4A3-202ENST00000396578 PNRC1Q12796 327 aaPredicted RBP12.55□□□□□ -0.4
COL4A3-202ENST00000396578 ABLIM2Q6H8Q1 611 aa12.55□□□□□ -0.4
COL4A3-202ENST00000396578 SPNS3Q6ZMD2 512 aa12.55□□□□□ -0.4
COL4A3-202ENST00000396578 CA13Q8N1Q1 262 aa12.55□□□□□ -0.4
COL4A3-202ENST00000396578 SPICQ8N5J4 248 aa12.55□□□□□ -0.4
COL4A3-202ENST00000396578 EXTL1Q92935 676 aa12.55□□□□□ -0.4
COL4A3-202ENST00000396578 HSPB8Q9UJY1 196 aa12.55□□□□□ -0.4
COL4A3-202ENST00000396578 RALYQ9UKM9 306 aaKnown RBP12.55□□□□□ -0.4
COL4A3-202ENST00000396578 TMEM272A0A1B0GTI8 110 aa12.55□□□□□ -0.4
COL4A3-202ENST00000396578 HMX2A2RU54 273 aa12.55□□□□□ -0.4
COL4A3-202ENST00000396578 NOVP48745 357 aa12.55□□□□□ -0.4
COL4A3-202ENST00000396578 B3GNTL1Q67FW5 361 aaPredicted RBP12.55□□□□□ -0.4
COL4A3-202ENST00000396578 SARAFQ96BY9 339 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms