RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 HACD4Q5VWC8 232 aa10.86□□□□□ -0.67
TRIM39-204ENST00000396548 UNQ6126/PRO20091Q6UXV3 157 aa10.86□□□□□ -0.67
TRIM39-204ENST00000396548 GDPD3Q7L5L3 318 aa10.86□□□□□ -0.67
TRIM39-204ENST00000396548 RTN4RL2Q86UN3 420 aa10.86□□□□□ -0.67
TRIM39-204ENST00000396548 ZSCAN4Q8NAM6 433 aaPredicted RBP10.86□□□□□ -0.67
TRIM39-204ENST00000396548 DVL3Q92997 716 aaPredicted RBP10.86□□□□□ -0.67
TRIM39-204ENST00000396548 FAM46BQ96A09 425 aa10.86□□□□□ -0.67
TRIM39-204ENST00000396548 DIABLOQ9NR28 239 aa10.86□□□□□ -0.67
TRIM39-204ENST00000396548 HCFC1P51610 2035 aa10.86□□□□□ -0.67
TRIM39-204ENST00000396548 MELTFP08582 738 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 SPNP16150 400 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 CA6P23280 308 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 GPM6AP51674 278 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 ZNF260Q3ZCT1 412 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 Q6ZR03 302 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 FJX1Q86VR8 437 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 SAXO1Q8IYX7 474 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 OR8G5Q8NG78 346 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 NEK6Q9HC98 313 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 ING4Q9UNL4 249 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 DPRXA6NFQ7 191 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 ORC5O43913 435 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 SSX4O60224 188 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 PTTG1O95997 202 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 MPZP25189 248 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 TMEM50BP56557 158 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 MRPS10P82664 201 aaKnown RBP10.85□□□□□ -0.67
TRIM39-204ENST00000396548 MINDY2Q8NBR6 621 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 GALNT11Q8NCW6 608 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 NUP37Q8NFH4 326 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 OR52I2Q8NH67 350 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 C15orf40Q8WUR7 153 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 TMEM171Q8WVE6 324 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 CYYR1Q96J86 154 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 OR51I2Q9H344 312 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 BANF2Q9H503 90 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 MRPS7Q9Y2R9 242 aaKnown RBP10.85□□□□□ -0.67
TRIM39-204ENST00000396548 MLNRO43193 412 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 ANGPTL7O43827 346 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 OCMP0CE72 109 aaPredicted RBP10.85□□□□□ -0.67
TRIM39-204ENST00000396548 GLRXP35754 106 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 KLF9Q13886 244 aaPredicted RBP10.85□□□□□ -0.67
TRIM39-204ENST00000396548 PLAC9Q5JTB6 97 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 RNASE6Q93091 150 aaKnown RBP10.85□□□□□ -0.67
TRIM39-204ENST00000396548 Q96M66 194 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 C11orf54Q9H0W9 315 aaPredicted RBP10.85□□□□□ -0.67
TRIM39-204ENST00000396548 ELF5Q9UKW6 265 aaPredicted RBP10.85□□□□□ -0.67
TRIM39-204ENST00000396548 KCNK7Q9Y2U2 307 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 ACACBO00763 2458 aa10.85□□□□□ -0.67
TRIM39-204ENST00000396548 IGLV3-9A0A075B6K5 115 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 TRAV18A0A075B6X5 111 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 OR5B21A6NL26 309 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 ZNF732B4DXR9 585 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 MGMTP16455 207 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 IGFBP7Q16270 282 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 SLC22A6Q4U2R8 563 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 RAB12Q6IQ22 244 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 TMEM200AQ86VY9 491 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 POC5Q8NA72 575 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 ACBD4Q8NC06 268 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 OR10K1Q8NGX5 313 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 OR10R2Q8NGX6 335 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 TMEM59Q9BXS4 323 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 METTL9Q9H1A3 318 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 ESPL1Q14674 2120 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 NKX2-6A6NCS4 301 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 H0YL77 283 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 IGHV3-13P01766 116 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 CRYAAP02489 173 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 CD3GP09693 182 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 TMEM225BP0DP42 221 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 ST3GAL2Q16842 350 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 ZNF718Q3SXZ3 478 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 ELP2Q6IA86 826 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 ZNF611Q8N823 705 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 GPX8Q8TED1 209 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 CST11Q9H112 138 aa10.84□□□□□ -0.67
TRIM39-204ENST00000396548 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.84□□□□□ -0.67
TRIM39-204ENST00000396548 A0A1B0GUH1 482 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 METTL21EPA6NDL7 271 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 ATP6V1G2-DDX39BF2Z307 99 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 SOCS1O15524 211 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 CRTAPO75718 401 aaPredicted RBP10.83□□□□□ -0.68
TRIM39-204ENST00000396548 MPIG6BO95866 241 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 SFTPBP07988 381 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 CHRM2P08172 466 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 GRNP28799 593 aaKnown RBP10.83□□□□□ -0.68
TRIM39-204ENST00000396548 BTCP35070 178 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 UQCRFS1P47985 274 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 SNTB2Q13425 540 aaKnown RBP10.83□□□□□ -0.68
TRIM39-204ENST00000396548 MTFR2Q6P444 385 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 LRP11Q86VZ4 500 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 SEH1LQ96EE3 360 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 SCGNO76038 276 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 PTAFRP25105 342 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 SRP9P49458 86 aaKnown RBP10.83□□□□□ -0.68
TRIM39-204ENST00000396548 VEGFCP49767 419 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 TRIQKQ629K1 86 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 SIGIRRQ6IA17 410 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 ZC3HAV1LQ96H79 300 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms