RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 CXCL2P19875 107 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 NDUFA5Q16718 116 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 CLVS2Q5SYC1 327 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 SIGIRRQ6IA17 410 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 C11orf88Q6PI97 169 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 PCNPQ8WW12 178 aaKnown RBP13.05□□□□□ -0.32
GPC3-202ENST00000394299 BORCS8Q96FH0 119 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 PRRT1Q99946 306 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 NUDT16L1Q9BRJ7 211 aaKnown RBP13.05□□□□□ -0.32
GPC3-202ENST00000394299 C1QTNF5Q9BXJ0 243 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 ZNF850A8MQ14 1090 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 CCSO14618 274 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 AKR1C4P17516 323 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 PI3P19957 117 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 RBP2P50120 134 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 RRADP55042 308 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 PER3P56645 1201 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 PPP1R1AQ13522 171 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 CAMK2BQ13554 666 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 C12orf45Q8N5I9 185 aaPredicted RBP13.05□□□□□ -0.32
GPC3-202ENST00000394299 DYRK2Q92630 601 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 OPN4Q9UHM6 478 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 GPR160Q9UJ42 338 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 PLEKHA6Q9Y2H5 1048 aa13.05□□□□□ -0.32
GPC3-202ENST00000394299 SPTBN2O15020 2390 aa13.04□□□□□ -0.32
GPC3-202ENST00000394299 ERVH48-1M5A8F1 160 aa13.04□□□□□ -0.32
GPC3-202ENST00000394299 MSTNO14793 375 aa13.04□□□□□ -0.32
GPC3-202ENST00000394299 HLA-AP01891 365 aaKnown RBP13.04□□□□□ -0.32
GPC3-202ENST00000394299 SFTPBP07988 381 aa13.04□□□□□ -0.32
GPC3-202ENST00000394299 CD82P27701 267 aa13.04□□□□□ -0.32
GPC3-202ENST00000394299 NPY4RP50391 375 aa13.04□□□□□ -0.32
GPC3-202ENST00000394299 GK2Q14410 553 aaPredicted RBP13.04□□□□□ -0.32
GPC3-202ENST00000394299 RSU1Q15404 277 aa13.04□□□□□ -0.32
GPC3-202ENST00000394299 DEFB109BQ30KR1 87 aa13.04□□□□□ -0.32
GPC3-202ENST00000394299 LY6G6FQ5SQ64 297 aa13.04□□□□□ -0.32
GPC3-202ENST00000394299 PLCXD3Q63HM9 321 aa13.04□□□□□ -0.32
GPC3-202ENST00000394299 TMEM42Q69YG0 159 aa13.04□□□□□ -0.32
GPC3-202ENST00000394299 CALHM1Q8IU99 346 aa13.04□□□□□ -0.32
GPC3-202ENST00000394299 GCNT2Q8N0V5 402 aa13.04□□□□□ -0.32
GPC3-202ENST00000394299 TMEM178AQ8NBL3 297 aa13.04□□□□□ -0.32
GPC3-202ENST00000394299 FAAP24Q9BTP7 215 aa13.04□□□□□ -0.32
GPC3-202ENST00000394299 ZDHHC11Q9H8X9 412 aa13.04□□□□□ -0.32
GPC3-202ENST00000394299 SLC2A8Q9NY64 477 aa13.04□□□□□ -0.32
GPC3-202ENST00000394299 GHRLQ9UBU3 117 aa13.04□□□□□ -0.32
GPC3-202ENST00000394299 STARD10Q9Y365 291 aa13.04□□□□□ -0.32
GPC3-202ENST00000394299 A0A1W2PR80 420 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 IL18BPO95998 194 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 CFDP00746 253 aaPredicted RBP13.03□□□□□ -0.32
GPC3-202ENST00000394299 TPOP07202 933 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 SNU13P55769 128 aaKnown RBP13.03□□□□□ -0.32
GPC3-202ENST00000394299 RAP2BP61225 183 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 BAMBIQ13145 260 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 RNPS1Q15287 305 aaKnown RBP13.03□□□□□ -0.32
GPC3-202ENST00000394299 GRK1Q15835 563 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 IGFBP7Q16270 282 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 PIGYQ3MUY2 71 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 ST8SIA4Q92187 359 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 SPSB1Q96BD6 273 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 Q96M66 194 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 OCSTAMPQ9BR26 566 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 TM2D1Q9BX74 207 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 METTL9Q9H1A3 318 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 PLEKHJ1Q9NW61 149 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 PLSCR5A0PG75 271 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 SLC22A20A6NK97 555 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 DHRS7CA6NNS2 312 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 C3orf80F5H4A9 247 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 H3BUI4 141 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 CSTBP04080 98 aaKnown RBP13.03□□□□□ -0.32
GPC3-202ENST00000394299 AGTR1P30556 359 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 CLN3Q13286 438 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 OR8B8Q15620 311 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 COLCA1Q6ZS62 124 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 STEAP2Q8NFT2 490 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 OR56B2PQ8NGI1 322 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 CASTOR1Q8WTX7 329 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 CCDC107Q8WV48 283 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 SEC22AQ96IW7 307 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 FGF23Q9GZV9 251 aaPredicted RBP13.03□□□□□ -0.32
GPC3-202ENST00000394299 ZNF701Q9NV72 531 aaPredicted RBP13.03□□□□□ -0.32
GPC3-202ENST00000394299 PRR13Q9NZ81 148 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 TNRC6AQ8NDV7 1962 aaKnown RBP13.03□□□□□ -0.32
GPC3-202ENST00000394299 PTPRZ1P23471 2315 aaPredicted RBP13.03□□□□□ -0.32
GPC3-202ENST00000394299 MED12LQ86YW9 2145 aa13.03□□□□□ -0.32
GPC3-202ENST00000394299 F5H5P2 479 aa13.02□□□□□ -0.32
GPC3-202ENST00000394299 ZNF205O95201 554 aa13.02□□□□□ -0.32
GPC3-202ENST00000394299 NAT1P18440 290 aa13.02□□□□□ -0.32
GPC3-202ENST00000394299 AMY2BP19961 511 aa13.02□□□□□ -0.32
GPC3-202ENST00000394299 CPT2P23786 658 aa13.02□□□□□ -0.32
GPC3-202ENST00000394299 ZBTB25P24278 435 aa13.02□□□□□ -0.32
GPC3-202ENST00000394299 CNN3Q15417 329 aaKnown RBP13.02□□□□□ -0.32
GPC3-202ENST00000394299 PNLIPRP3Q17RR3 467 aa13.02□□□□□ -0.32
GPC3-202ENST00000394299 NRN1LQ496H8 165 aa13.02□□□□□ -0.32
GPC3-202ENST00000394299 TEX261Q6UWH6 196 aa13.02□□□□□ -0.32
GPC3-202ENST00000394299 SLC25A42Q86VD7 318 aa13.02□□□□□ -0.32
GPC3-202ENST00000394299 BHLHE23Q8NDY6 225 aa13.02□□□□□ -0.32
GPC3-202ENST00000394299 CCDC54Q8NEL0 328 aa13.02□□□□□ -0.32
GPC3-202ENST00000394299 CSNK2A3Q8NEV1 391 aa13.02□□□□□ -0.32
GPC3-202ENST00000394299 ELMOD3Q96FG2 381 aa13.02□□□□□ -0.32
GPC3-202ENST00000394299 PRDM14Q9GZV8 571 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms