RNA–Protein interactions for RNA: ENST00000393272.7

NPHP1-203, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 2,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-203ENST00000393272 C14orf166Q9Y224 244 aaKnown RBP6.33□□□□□ -1.4
NPHP1-203ENST00000393272 MRPS2Q9Y399 296 aaKnown RBP6.33□□□□□ -1.4
NPHP1-203ENST00000393272 MRPS23Q9Y3D9 190 aaKnown RBP6.33□□□□□ -1.4
NPHP1-203ENST00000393272 V9GYS6 101 aa6.33□□□□□ -1.4
NPHP1-203ENST00000393272 NSG1A0A0A6YYJ2 146 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 A0A1B0GU03 582 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 B4DEV8 164 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 C11orf98E9PRG8 122 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 FOXS1O43638 330 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 SLC16A7O60669 478 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 SCGNO76038 276 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 MPZL1O95297 269 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 AHSA1O95433 338 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 GSTP1P09211 210 aaKnown RBP6.32□□□□□ -1.4
NPHP1-203ENST00000393272 CST2P09228 141 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 FGF5P12034 268 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 ATP6V0CP27449 155 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 HSD11B1P28845 292 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 CCR4P51679 360 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 TMEM50BP56557 158 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 CSNK2A1P68400 391 aaPredicted RBP6.32□□□□□ -1.4
NPHP1-203ENST00000393272 ARFRP1Q13795 201 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 C1orf194Q5T5A4 169 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 C1orf140Q5VVS0 124 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 ERN2Q76MJ5 926 aaKnown RBP6.32□□□□□ -1.4
NPHP1-203ENST00000393272 SLC16A14Q7RTX9 510 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 MRPL41Q8IXM3 137 aaKnown RBP6.32□□□□□ -1.4
NPHP1-203ENST00000393272 CSNK2A3Q8NEV1 391 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 OR52N5Q8NH56 324 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 HAS2Q92819 552 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 IRF7Q92985 503 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 ADAT3Q96EY9 351 aaPredicted RBP6.32□□□□□ -1.4
NPHP1-203ENST00000393272 REEP6Q96HR9 211 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 ARHGAP5-AS1Q96IT6 56 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 CABLES2Q9BTV7 478 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 TPSD1Q9BZJ3 242 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 CHST11Q9NPF2 352 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 GAB2Q9UQC2 676 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 POLR3KQ9Y2Y1 108 aaPredicted RBP6.32□□□□□ -1.4
NPHP1-203ENST00000393272 R4GMQ9 66 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 PHF3Q92576 2039 aaKnown RBP6.32□□□□□ -1.4
NPHP1-203ENST00000393272 YLPM1P49750 1951 aaKnown RBP6.32□□□□□ -1.4
NPHP1-203ENST00000393272 FAM221AA4D161 298 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 KLF8O95600 359 aaPredicted RBP6.32□□□□□ -1.4
NPHP1-203ENST00000393272 CYB5R3P00387 301 aaPredicted RBP6.32□□□□□ -1.4
NPHP1-203ENST00000393272 CD55P08174 381 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 IRF2P14316 349 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 CTLA4P16410 223 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 SELEP16581 610 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 BCKDHBP21953 392 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 CST5P28325 142 aaPredicted RBP6.32□□□□□ -1.4
NPHP1-203ENST00000393272 POLR2HP52434 150 aaKnown RBP6.32□□□□□ -1.4
NPHP1-203ENST00000393272 ELLP55199 621 aaPredicted RBP6.32□□□□□ -1.4
NPHP1-203ENST00000393272 SNU13P55769 128 aaKnown RBP6.32□□□□□ -1.4
NPHP1-203ENST00000393272 CLN3Q13286 438 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 ZNF141Q15928 474 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 COA6Q5JTJ3 125 aaKnown RBP6.32□□□□□ -1.4
NPHP1-203ENST00000393272 ZNF506Q5JVG8 444 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 SAPCD1Q5SSQ6 148 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 CDCP2Q5VXM1 449 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 WDR25Q64LD2 544 aaPredicted RBP6.32□□□□□ -1.4
NPHP1-203ENST00000393272 SLC25A26Q70HW3 274 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 ATG4DQ86TL0 474 aaPredicted RBP6.32□□□□□ -1.4
NPHP1-203ENST00000393272 FAM185AQ8N0U4 392 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 ZNF283Q8N7M2 679 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 NOXO1Q8NFA2 376 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 OR2AJ1Q8NGZ0 328 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 SNIP1Q8TAD8 396 aaKnown RBP6.32□□□□□ -1.4
NPHP1-203ENST00000393272 NEK7Q8TDX7 302 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 LIPHQ8WWY8 451 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 ZNF524Q96C55 264 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 CTHRC1Q96CG8 243 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 SCARF2Q96GP6 870 aaPredicted RBP6.32□□□□□ -1.4
NPHP1-203ENST00000393272 IGSF21Q96ID5 467 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 WFIKKN1Q96NZ8 548 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 KLHDC3Q9BQ90 382 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 NUDT16L1Q9BRJ7 211 aaKnown RBP6.32□□□□□ -1.4
NPHP1-203ENST00000393272 RAB11FIP5Q9BXF6 653 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 GPR173Q9NS66 373 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 LANCL2Q9NS86 450 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 COL4A6Q14031 1691 aa6.32□□□□□ -1.4
NPHP1-203ENST00000393272 SERINC4A6NH21 518 aa6.31□□□□□ -1.4
NPHP1-203ENST00000393272 M0QZK8 103 aa6.31□□□□□ -1.4
NPHP1-203ENST00000393272 HRKO00198 91 aa6.31□□□□□ -1.4
NPHP1-203ENST00000393272 ETV2O00321 342 aaPredicted RBP6.31□□□□□ -1.4
NPHP1-203ENST00000393272 TCF21O43680 179 aa6.31□□□□□ -1.4
NPHP1-203ENST00000393272 CDC14BO60729 498 aa6.31□□□□□ -1.4
NPHP1-203ENST00000393272 GGCTO75223 188 aaKnown RBP6.31□□□□□ -1.4
NPHP1-203ENST00000393272 GPR75O95800 540 aa6.31□□□□□ -1.4
NPHP1-203ENST00000393272 BGLAPP02818 100 aa6.31□□□□□ -1.4
NPHP1-203ENST00000393272 ISG15P05161 165 aa6.31□□□□□ -1.4
NPHP1-203ENST00000393272 MMP9P14780 707 aa6.31□□□□□ -1.4
NPHP1-203ENST00000393272 CSF2RAP15509 400 aa6.31□□□□□ -1.4
NPHP1-203ENST00000393272 ALDH3B1P43353 468 aa6.31□□□□□ -1.4
NPHP1-203ENST00000393272 NOVA1P51513 510 aaKnown RBP6.31□□□□□ -1.4
NPHP1-203ENST00000393272 RPL23AP62750 156 aaKnown RBP6.31□□□□□ -1.4
NPHP1-203ENST00000393272 RBX1P62877 108 aa6.31□□□□□ -1.4
NPHP1-203ENST00000393272 ZFP36L1Q07352 338 aaKnown RBP6.31□□□□□ -1.4
NPHP1-203ENST00000393272 TCTN1Q2MV58 587 aa6.31□□□□□ -1.4
NPHP1-203ENST00000393272 SP6Q3SY56 376 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms