RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 NCBP2LA6PVI3 153 aaKnown RBP-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 CDRT15L2A8MXV6 281 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 IDSB3KWA1 339 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 SYS1-DBNDD2H3BUS1 97 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 AIPO00170 330 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 P4HA2O15460 535 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 PSCAO43653 123 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 BUB1O43683 1085 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 ZNF780AO75290 641 aaPredicted RBP-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 PITX3O75364 302 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 TPPPO94811 219 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 OR5F1O95221 314 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 PARNO95453 639 aaKnown RBP-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 SYNGR4O95473 234 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 SCGB1D2O95969 90 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 ASGR1P07306 291 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 SPINK8P0C7L1 97 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 C8orf89P0DMQ9 161 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 SAGP10523 405 aaPredicted RBP-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 ZNF43P17038 809 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 DRD5P21918 477 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 RBM34P42696 430 aaKnown RBP-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 MFAP3P55082 362 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 MRPS11P82912 194 aaKnown RBP-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 ICA1Q05084 483 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 CEACAM7Q14002 265 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 POSTNQ15063 836 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 MAPK6Q16659 721 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 PARP6Q2NL67 630 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 ANKDD1AQ495B1 522 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 JAKMIP3Q5VZ66 844 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 ARMC3Q5W041 872 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 TMEM236Q5W0B7 351 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 GLT8D1Q68CQ7 371 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 GPR139Q6DWJ6 353 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 APOBEC3HQ6NTF7 200 aaKnown RBP-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 TEX38Q6PEX7 206 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 CYP20A1Q6UW02 462 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 FAM92BQ6ZTR7 304 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 SSBP3-AS1Q7Z2R9 100 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 C5orf38Q86SI9 138 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 SCD5Q86SK9 330 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 TICAM2Q86XR7 235 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 WFDC13Q8IUB5 93 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 SGPP2Q8IWX5 399 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 ANKRD29Q8N6D5 301 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 OR10G9Q8NGN4 311 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 LKAAEAR1Q8TD35 194 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 GTF2H4Q92759 462 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 P3H4Q92791 437 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 PNPLA2Q96AD5 504 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 TAMM41Q96BW9 452 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 PYCR2Q96C36 320 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 C1orf74Q96LT6 269 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 ALKBH7Q9BT30 221 aaPredicted RBP-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 PSMG3Q9BT73 122 aaPredicted RBP-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 C1QTNF6Q9BXI9 259 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 LRRC2Q9BYS8 371 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 API5Q9BZZ5 524 aaKnown RBP-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 ZYG11BQ9C0D3 744 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 SELENOIQ9C0D9 397 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 OR11A1Q9GZK7 315 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 YIPF3Q9GZM5 350 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 MFSD1Q9H3U5 465 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 DSN1Q9H410 356 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 TRABDQ9H4I3 376 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 BEX1Q9HBH7 125 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 PLGRKTQ9HBL7 147 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 ANKHQ9HCJ1 492 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 AGPAT4Q9NRZ5 378 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 MRPL16Q9NX20 251 aaKnown RBP-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 TMOD3Q9NYL9 352 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 XCL2Q9UBD3 114 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 COQ4Q9Y3A0 265 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 ALG6Q9Y672 507 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 FKBP7Q9Y680 259 aa-1.79□□□□□ -2.7
RNU6-540P-201ENST00000384622 FER1L6Q2WGJ9 1857 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 DOCK5Q9H7D0 1870 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 CHD2O14647 1828 aaKnown RBP-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 EIF3AQ14152 1382 aaKnown RBP-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 MROH7Q68CQ1 1323 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 IGHV3OR16-13A0A075B7E8 117 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 IGHV3-74A0A0B4J1X5 117 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 TRBV6-1A0A0K0K1D8 114 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 GLYATL1P3A0A0U1RQE8 302 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 PRORSD1PA6NEY8 169 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 ZNF727A8MUV8 499 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 C9JCJ5 164 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 E9PLD3 99 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 J3QQQ9 107 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 KIAA0513O60268 411 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 PDE5AO76074 875 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 CD160O95971 181 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 MBD3O95983 291 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 DNAL4O96015 105 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 IGHMP01871 453 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 HLA-DRB1P01911 266 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 CSTBP04080 98 aaKnown RBP-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 IGF1P05019 195 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 EIF4EP06730 217 aaKnown RBP-1.8□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms