RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 NOTCH3Q9UM47 2321 aa16.77■□□□□ 0.28
CSPG5-202ENST00000383738 TMPRSS11FQ6ZWK6 438 aa16.77■□□□□ 0.28
CSPG5-202ENST00000383738 OVCH2Q7RTZ1 564 aa16.77■□□□□ 0.28
CSPG5-202ENST00000383738 WDR5BQ86VZ2 330 aa16.77■□□□□ 0.28
CSPG5-202ENST00000383738 SLC25A43Q8WUT9 341 aaPredicted RBP16.77■□□□□ 0.28
CSPG5-202ENST00000383738 KIRREL1Q96J84 757 aa16.77■□□□□ 0.28
CSPG5-202ENST00000383738 ABHD6Q9BV23 337 aa16.77■□□□□ 0.28
CSPG5-202ENST00000383738 MYO18BQ8IUG5 2567 aa16.77■□□□□ 0.28
CSPG5-202ENST00000383738 A0A087WV48 116 aa16.77■□□□□ 0.27
CSPG5-202ENST00000383738 ZNF587BE7ETH6 402 aa16.77■□□□□ 0.27
CSPG5-202ENST00000383738 FAM157BP0CG42 384 aa16.77■□□□□ 0.27
CSPG5-202ENST00000383738 HLA-DOBP13765 273 aa16.77■□□□□ 0.27
CSPG5-202ENST00000383738 ZNF136P52737 540 aa16.77■□□□□ 0.27
CSPG5-202ENST00000383738 SPATA46Q5T0L3 261 aa16.77■□□□□ 0.27
CSPG5-202ENST00000383738 STPG1Q5TH74 334 aa16.77■□□□□ 0.27
CSPG5-202ENST00000383738 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.77■□□□□ 0.27
CSPG5-202ENST00000383738 SCARF2Q96GP6 870 aaPredicted RBP16.77■□□□□ 0.27
CSPG5-202ENST00000383738 IL17BQ9UHF5 180 aa16.77■□□□□ 0.27
CSPG5-202ENST00000383738 OR2M5A3KFT3 312 aa16.77■□□□□ 0.27
CSPG5-202ENST00000383738 PTP4A3O75365 173 aa16.77■□□□□ 0.27
CSPG5-202ENST00000383738 YIF1AO95070 293 aa16.77■□□□□ 0.27
CSPG5-202ENST00000383738 CTLA4P16410 223 aa16.77■□□□□ 0.27
CSPG5-202ENST00000383738 RAB32Q13637 225 aa16.77■□□□□ 0.27
CSPG5-202ENST00000383738 CEACAM16Q2WEN9 425 aa16.77■□□□□ 0.27
CSPG5-202ENST00000383738 HFEQ30201 348 aa16.77■□□□□ 0.27
CSPG5-202ENST00000383738 MEGF10Q96KG7 1140 aa16.77■□□□□ 0.27
CSPG5-202ENST00000383738 MRGPRX4Q96LA9 322 aa16.77■□□□□ 0.27
CSPG5-202ENST00000383738 RAB33BQ9H082 229 aa16.77■□□□□ 0.27
CSPG5-202ENST00000383738 USF3Q68DE3 2245 aa16.76■□□□□ 0.27
CSPG5-202ENST00000383738 RER1O15258 196 aa16.76■□□□□ 0.27
CSPG5-202ENST00000383738 EIF3GO75821 320 aaKnown RBP eCLIP16.76■□□□□ 0.27
CSPG5-202ENST00000383738 CPN1P15169 458 aa16.76■□□□□ 0.27
CSPG5-202ENST00000383738 RIPPLY1Q0D2K3 151 aa16.76■□□□□ 0.27
CSPG5-202ENST00000383738 RNF212Q495C1 297 aa16.76■□□□□ 0.27
CSPG5-202ENST00000383738 ATPAF1Q5TC12 328 aaPredicted RBP16.76■□□□□ 0.27
CSPG5-202ENST00000383738 OR6S1Q8NH40 331 aa16.76■□□□□ 0.27
CSPG5-202ENST00000383738 SGK3Q96BR1 496 aa16.76■□□□□ 0.27
CSPG5-202ENST00000383738 ZMIZ1Q9ULJ6 1067 aa16.76■□□□□ 0.27
CSPG5-202ENST00000383738 B3GALT5Q9Y2C3 310 aa16.76■□□□□ 0.27
CSPG5-202ENST00000383738 PRUNE2Q8WUY3 3088 aa16.76■□□□□ 0.27
CSPG5-202ENST00000383738 PTPRQQ9UMZ3 2332 aa16.76■□□□□ 0.27
CSPG5-202ENST00000383738 FABP4P15090 132 aa16.76■□□□□ 0.27
CSPG5-202ENST00000383738 RPL12P30050 165 aaKnown RBP16.76■□□□□ 0.27
CSPG5-202ENST00000383738 TRA2AQ13595 282 aaKnown RBP eCLIP16.76■□□□□ 0.27
CSPG5-202ENST00000383738 MIDNQ504T8 468 aa16.76■□□□□ 0.27
CSPG5-202ENST00000383738 ELFN2Q5R3F8 820 aa16.76■□□□□ 0.27
CSPG5-202ENST00000383738 ETV3LQ6ZN32 361 aa16.76■□□□□ 0.27
CSPG5-202ENST00000383738 OR5L1Q8NGL2 311 aa16.76■□□□□ 0.27
CSPG5-202ENST00000383738 SLC25A38Q96DW6 304 aa16.76■□□□□ 0.27
CSPG5-202ENST00000383738 UCN2Q96RP3 112 aa16.76■□□□□ 0.27
CSPG5-202ENST00000383738 GAB2Q9UQC2 676 aa16.76■□□□□ 0.27
CSPG5-202ENST00000383738 FER1L5A0AVI2 2057 aa16.76■□□□□ 0.27
CSPG5-202ENST00000383738 CCL2P13500 99 aa16.76■□□□□ 0.27
CSPG5-202ENST00000383738 HOXB9P17482 250 aaPredicted RBP16.76■□□□□ 0.27
CSPG5-202ENST00000383738 UBL7Q96S82 380 aaPredicted RBP16.76■□□□□ 0.27
CSPG5-202ENST00000383738 A0A1W2PPE2 198 aa16.75■□□□□ 0.27
CSPG5-202ENST00000383738 FTCDNL1E5RQL4 147 aa16.75■□□□□ 0.27
CSPG5-202ENST00000383738 K7ESF4 209 aa16.75■□□□□ 0.27
CSPG5-202ENST00000383738 SCGB1D1O95968 90 aa16.75■□□□□ 0.27
CSPG5-202ENST00000383738 OR2A2Q6IF42 318 aa16.75■□□□□ 0.27
CSPG5-202ENST00000383738 ANKRD16Q6P6B7 361 aa16.75■□□□□ 0.27
CSPG5-202ENST00000383738 ZFP62Q8NB50 900 aaPredicted RBP16.75■□□□□ 0.27
CSPG5-202ENST00000383738 ASB17Q8WXJ9 295 aa16.75■□□□□ 0.27
CSPG5-202ENST00000383738 FRRS1LQ9P0K9 344 aa16.75■□□□□ 0.27
CSPG5-202ENST00000383738 KPTNQ9Y664 436 aa16.75■□□□□ 0.27
CSPG5-202ENST00000383738 CYB5BO43169 146 aa16.75■□□□□ 0.27
CSPG5-202ENST00000383738 CD37P11049 281 aa16.75■□□□□ 0.27
CSPG5-202ENST00000383738 GCH1P30793 250 aa16.75■□□□□ 0.27
CSPG5-202ENST00000383738 GALNSP34059 522 aa16.75■□□□□ 0.27
CSPG5-202ENST00000383738 PLXDC2Q6UX71 529 aa16.75■□□□□ 0.27
CSPG5-202ENST00000383738 KLF13Q9Y2Y9 288 aaPredicted RBP16.75■□□□□ 0.27
CSPG5-202ENST00000383738 PTPRDP23468 1912 aa16.75■□□□□ 0.27
CSPG5-202ENST00000383738 WNT11O96014 354 aa16.75■□□□□ 0.27
CSPG5-202ENST00000383738 RAB11AP62491 216 aa16.75■□□□□ 0.27
CSPG5-202ENST00000383738 C5orf46Q6UWT4 87 aa16.75■□□□□ 0.27
CSPG5-202ENST00000383738 ZSCAN4Q8NAM6 433 aaPredicted RBP16.75■□□□□ 0.27
CSPG5-202ENST00000383738 ZNF721Q8TF20 911 aa16.75■□□□□ 0.27
CSPG5-202ENST00000383738 C11orf40Q8WZ69 217 aa16.75■□□□□ 0.27
CSPG5-202ENST00000383738 OR5B12Q96R08 314 aa16.75■□□□□ 0.27
CSPG5-202ENST00000383738 RASL12Q9NYN1 266 aa16.75■□□□□ 0.27
CSPG5-202ENST00000383738 ZNF724A8MTY0 619 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 VSTM5A8MXK1 200 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 TGFBR3LH3BV60 316 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 NKX2-8O15522 239 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 ZNF574Q6ZN55 896 aaPredicted RBP16.74■□□□□ 0.27
CSPG5-202ENST00000383738 OR52N5Q8NH56 324 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 RHOVQ96L33 236 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 SPSB2Q99619 263 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 MAGT1Q9H0U3 335 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 KIF26BQ2KJY2 2108 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 TMEM272A0A1B0GTI8 110 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 THBS2P35442 1172 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 CX3CR1P49238 355 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 F2RL1P55085 397 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 TESK1Q15569 626 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 CYB5R2Q6BCY4 276 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 GJC3Q8NFK1 279 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 NANOS1Q8WY41 292 aaKnown RBP16.74■□□□□ 0.27
CSPG5-202ENST00000383738 GPR84Q9NQS5 396 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 GPR173Q9NS66 373 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms