RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 OSGIN2Q9Y236 505 aa14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 C9J4A7 227 aa14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 SFTA3P0C7M3 94 aa14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 BLVRBP30043 206 aaPredicted RBP14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 PTGER4P35408 488 aa14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 RFC3P40938 356 aa14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 THEM4Q5T1C6 240 aa14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 LYZL4Q96KX0 146 aa14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 MRGPRX4Q96LA9 322 aa14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 UCN2Q96RP3 112 aa14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 OR10A2Q9H208 303 aa14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 ELL3Q9HB65 397 aaPredicted RBP14.26□□□□□ -0.13
NKX3-1-201ENST00000380871 STMND1H3BQB6 276 aa14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 SNAPINO95295 136 aa14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 IGHG1P01857 330 aa14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 OCSTAMPQ9BR26 566 aa14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 SEC11CQ9BY50 192 aa14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 TAF9BQ9HBM6 251 aa14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 NPIPB13A6NJU9 1138 aa14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 CEACAM18A8MTB9 384 aa14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 NPIPB4C9JG80 1138 aa14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 FAHP16930 419 aa14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 CD80P33681 288 aa14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 KISS1Q15726 138 aa14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 ZNF468Q5VIY5 522 aaPredicted RBP14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 OR56B1Q8NGI3 324 aa14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 C2orf50Q96LR7 162 aa14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 PCDHGA1Q9Y5H4 931 aa14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 B3GALT1Q9Y5Z6 326 aa14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 F5H5K5 113 aa14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 TP53I11O14683 189 aa14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 SLC6A9P48067 706 aa14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 PCOLCEQ15113 449 aa14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 C6orf201Q7Z4U5 140 aa14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 NUDT16L1Q9BRJ7 211 aaKnown RBP14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 ZFP57Q9NU63 452 aa14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 FBXO9Q9UK97 447 aaPredicted RBP14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 MCTS1Q9ULC4 181 aaKnown RBP14.25□□□□□ -0.13
NKX3-1-201ENST00000380871 A0A1W2PNV4 684 aa14.24□□□□□ -0.13
NKX3-1-201ENST00000380871 UMODP07911 640 aa14.24□□□□□ -0.13
NKX3-1-201ENST00000380871 HKR1P10072 659 aa14.24□□□□□ -0.13
NKX3-1-201ENST00000380871 OR6S1Q8NH40 331 aa14.24□□□□□ -0.13
NKX3-1-201ENST00000380871 PIGTQ969N2 578 aa14.24□□□□□ -0.13
NKX3-1-201ENST00000380871 LYL1P12980 280 aa14.24□□□□□ -0.13
NKX3-1-201ENST00000380871 ZNF708P17019 499 aa14.24□□□□□ -0.13
NKX3-1-201ENST00000380871 HOXA1P49639 335 aaPredicted RBP14.24□□□□□ -0.13
NKX3-1-201ENST00000380871 CAV2P51636 162 aa14.24□□□□□ -0.13
NKX3-1-201ENST00000380871 IL15RAQ13261 267 aa14.24□□□□□ -0.13
NKX3-1-201ENST00000380871 TGIF1Q15583 401 aa14.24□□□□□ -0.13
NKX3-1-201ENST00000380871 YRDCQ86U90 279 aaKnown RBP14.24□□□□□ -0.13
NKX3-1-201ENST00000380871 SMIM8Q96KF7 97 aa14.24□□□□□ -0.13
NKX3-1-201ENST00000380871 RBM24Q9BX46 236 aaKnown RBP14.24□□□□□ -0.13
NKX3-1-201ENST00000380871 HS3ST3B1Q9Y662 390 aa14.24□□□□□ -0.13
NKX3-1-201ENST00000380871 NSG1A0A0A6YYJ2 146 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 DHRS7CA6NNS2 312 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 RNASEK-C17orf49H0YIS7 233 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 OR8U9P0C7N5 309 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 GLI4P10075 376 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 UBE2V2Q15819 145 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 IAH1Q2TAA2 248 aaPredicted RBP14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 MRPL14Q6P1L8 145 aaKnown RBP14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 UBALD2Q8IYN6 164 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 NAXEQ8NCW5 288 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 OR14K1Q8NGZ2 314 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 OR8U1Q8NH10 309 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 GLYATL2Q8WU03 294 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 COA4Q9NYJ1 87 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 TMEM265A0A087WTH1 108 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 MSTNO14793 375 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 GABRR1P24046 479 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 PTGFRP43088 359 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 IL34Q6ZMJ4 242 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 SSC4DQ8WTU2 575 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 BSCL2Q96G97 398 aaPredicted RBP14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 URM1Q9BTM9 101 aaKnown RBP14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 PECRQ9BY49 303 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 DKKL1Q9UK85 242 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 LINC01387J3KSC0 135 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 PNLIPP16233 465 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 SUMO3P55854 103 aaPredicted RBP14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 SLC25A47Q6Q0C1 308 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 DHRS11Q6UWP2 260 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 RPS19BP1Q86WX3 136 aaKnown RBP14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 RHBDD1Q8TEB9 315 aa14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 CHCHD2Q9Y6H1 151 aaPredicted RBP14.23□□□□□ -0.13
NKX3-1-201ENST00000380871 TRAPPC6AO75865 159 aa14.22□□□□□ -0.13
NKX3-1-201ENST00000380871 SCGB1D2O95969 90 aa14.22□□□□□ -0.13
NKX3-1-201ENST00000380871 DBHP09172 617 aa14.22□□□□□ -0.13
NKX3-1-201ENST00000380871 F2RL1P55085 397 aa14.22□□□□□ -0.13
NKX3-1-201ENST00000380871 CHRFAM7AQ494W8 412 aa14.22□□□□□ -0.13
NKX3-1-201ENST00000380871 ACTBL2Q562R1 376 aa14.22□□□□□ -0.13
NKX3-1-201ENST00000380871 AKR1E2Q96JD6 320 aa14.22□□□□□ -0.13
NKX3-1-201ENST00000380871 ZNF385AQ96PM9 386 aaKnown RBP14.22□□□□□ -0.13
NKX3-1-201ENST00000380871 USB1Q9BQ65 265 aaKnown RBP14.22□□□□□ -0.13
NKX3-1-201ENST00000380871 MOB1AQ9H8S9 216 aa14.22□□□□□ -0.13
NKX3-1-201ENST00000380871 FBXL17Q9UF56 701 aa14.22□□□□□ -0.13
NKX3-1-201ENST00000380871 MED19A0JLT2 244 aaPredicted RBP14.22□□□□□ -0.13
NKX3-1-201ENST00000380871 OR5H15A6NDH6 313 aa14.22□□□□□ -0.13
NKX3-1-201ENST00000380871 ZNHIT1O43257 154 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms