RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 IGHV1OR15-9A0A0B4J2B8 117 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 EML2O95834 649 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 GNG3P63215 75 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 CIB3Q96Q77 187 aaPredicted RBP12.63□□□□□ -0.39
TRIM13-202ENST00000378182 SAP30LQ9HAJ7 183 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 COX5AP20674 150 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 CASP3P42574 277 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 SLC17A1Q14916 467 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 HSD17B13Q7Z5P4 300 aaPredicted RBP12.63□□□□□ -0.39
TRIM13-202ENST00000378182 EXTL1Q92935 676 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 TCEAL7Q9BRU2 100 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 MAST2Q6P0Q8 1798 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 MYO5AQ9Y4I1 1855 aaKnown RBP12.63□□□□□ -0.39
TRIM13-202ENST00000378182 MCM3APO60318 1980 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 AKAP11Q9UKA4 1901 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 AKR7A2O43488 359 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 CEACAM3P40198 252 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 SUMO1P63165 101 aaKnown RBP12.63□□□□□ -0.39
TRIM13-202ENST00000378182 DGCR2P98153 550 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 ZNF441Q8N8Z8 693 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 TMEM171Q8WVE6 324 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 MVB12AQ96EY5 273 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 RNF2Q99496 336 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 FMODQ06828 376 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 EIF3IQ13347 325 aaKnown RBP12.63□□□□□ -0.39
TRIM13-202ENST00000378182 AQP6Q13520 282 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 FAM53BQ14153 422 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 ZNF528Q3MIS6 628 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 OR4D9Q8NGE8 314 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 SLC25A21Q9BQT8 299 aaPredicted RBP12.63□□□□□ -0.39
TRIM13-202ENST00000378182 A0A087WUJ7 227 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 AREGP15514 252 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 PPP1CAP62136 330 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 AVPI1Q5T686 147 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 SLC35E4Q6ICL7 350 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 ADAM5Q6NVV9 412 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 OR52B4Q8NGK2 314 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 BTF3L4Q96K17 158 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 SIGLEC11Q96RL6 698 aa12.63□□□□□ -0.39
TRIM13-202ENST00000378182 PMCHP20382 165 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 C21orf58P58505 322 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 TEX101Q9BY14 249 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 WDR61Q9GZS3 305 aaKnown RBP12.62□□□□□ -0.39
TRIM13-202ENST00000378182 LRP12Q9Y561 859 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 ARRB2P32121 409 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 GUCA2AQ02747 115 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 RNASEKQ6P5S7 137 aaKnown RBP12.62□□□□□ -0.39
TRIM13-202ENST00000378182 KIRREL2Q6UWL6 708 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 CALHM3Q86XJ0 350 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 CADM4Q8NFZ8 388 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 SMIM12Q96EX1 92 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 H7BYZ3 331 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 FBP1P09467 338 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 OR5H8P0DN80 308 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 NME1P15531 152 aaKnown RBP12.62□□□□□ -0.39
TRIM13-202ENST00000378182 LSM11P83369 360 aaKnown RBP eCLIP12.62□□□□□ -0.39
TRIM13-202ENST00000378182 KIAA0141Q14154 515 aaPredicted RBP12.62□□□□□ -0.39
TRIM13-202ENST00000378182 MRGPREQ86SM8 312 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 OR5D13Q8NGL4 314 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 GABRG3Q99928 467 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 BRS3P32247 399 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 G6PCP35575 357 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 RRN3P1Q2M238 152 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 OR10Z1Q8NGY1 313 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 SLC35B4Q969S0 331 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 FAM181BA6NEQ2 426 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 SEMA7AO75326 666 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 RPL12P30050 165 aaKnown RBP12.62□□□□□ -0.39
TRIM13-202ENST00000378182 PRSS41Q7RTY9 318 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 TIPARPQ7Z3E1 657 aaKnown RBP12.62□□□□□ -0.39
TRIM13-202ENST00000378182 SMIM7Q9BQ49 75 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 CABLES2Q9BTV7 478 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 C7orf72A4D263 438 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 SBK3P0C264 359 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 RAB5AP20339 215 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 USF1P22415 310 aaPredicted RBP12.62□□□□□ -0.39
TRIM13-202ENST00000378182 PSMB2P49721 201 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 PABPC1L2AQ5JQF8 200 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 MOGAT3Q86VF5 341 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 OR5AP2Q8NGF4 316 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 GPX8Q8TED1 209 aa12.62□□□□□ -0.39
TRIM13-202ENST00000378182 RFPL4AA6NLU0 287 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 RFPL4AL1F8VTS6 287 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 DHODHQ02127 395 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 CLEC2AQ6UVW9 174 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 CRYGNQ8WXF5 182 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 CHRDL1Q9BU40 450 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 TRDV1A0A1B0GX56 115 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 HRASP01112 189 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 MBP02144 154 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 NANOGP1Q8N7R0 232 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 MCHR2Q969V1 340 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 IGKV3D-11A0A0A0MRZ8 115 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 RER1O15258 196 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 NTN1O95631 604 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 IGKV3-11P04433 115 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 LIPAP38571 399 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 FOXO1Q12778 655 aa12.61□□□□□ -0.39
TRIM13-202ENST00000378182 TRA2AQ13595 282 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRIM13-202ENST00000378182 FAAP24Q9BTP7 215 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms