RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 CCL2P13500 99 aa16.45■□□□□ 0.22
SHANK1-202ENST00000359082 FUT3P21217 361 aa16.45■□□□□ 0.22
SHANK1-202ENST00000359082 CALCRP30988 508 aa16.45■□□□□ 0.22
SHANK1-202ENST00000359082 PJVKQ0ZLH3 352 aa16.45■□□□□ 0.22
SHANK1-202ENST00000359082 OR2A2Q6IF42 318 aa16.45■□□□□ 0.22
SHANK1-202ENST00000359082 TAAR3PQ9P1P4 343 aa16.45■□□□□ 0.22
SHANK1-202ENST00000359082 DNASE2O00115 360 aaPredicted RBP16.45■□□□□ 0.22
SHANK1-202ENST00000359082 IGLV3-25P01717 112 aa16.45■□□□□ 0.22
SHANK1-202ENST00000359082 OR4C5Q8NGB2 326 aa16.45■□□□□ 0.22
SHANK1-202ENST00000359082 AKIP1Q9NQ31 210 aa16.45■□□□□ 0.22
SHANK1-202ENST00000359082 A0A1B0GTL3 188 aa16.44■□□□□ 0.22
SHANK1-202ENST00000359082 MED19A0JLT2 244 aaPredicted RBP16.44■□□□□ 0.22
SHANK1-202ENST00000359082 GATCO43716 136 aaKnown RBP16.44■□□□□ 0.22
SHANK1-202ENST00000359082 HSBP1O75506 76 aa16.44■□□□□ 0.22
SHANK1-202ENST00000359082 CRYABP02511 175 aaKnown RBP16.44■□□□□ 0.22
SHANK1-202ENST00000359082 RPL7P18124 248 aaKnown RBP16.44■□□□□ 0.22
SHANK1-202ENST00000359082 OR3A4PP47883 348 aa16.44■□□□□ 0.22
SHANK1-202ENST00000359082 MRPL58Q14197 206 aaKnown RBP16.44■□□□□ 0.22
SHANK1-202ENST00000359082 ETFDHQ16134 617 aa16.44■□□□□ 0.22
SHANK1-202ENST00000359082 GLDNQ6ZMI3 551 aaPredicted RBP16.44■□□□□ 0.22
SHANK1-202ENST00000359082 RBM14Q96PK6 669 aaKnown RBP16.44■□□□□ 0.22
SHANK1-202ENST00000359082 COX7A1P24310 79 aa16.44■□□□□ 0.22
SHANK1-202ENST00000359082 RHOBP62745 196 aa16.44■□□□□ 0.22
SHANK1-202ENST00000359082 TTC9Q92623 222 aa16.44■□□□□ 0.22
SHANK1-202ENST00000359082 OCIAD1Q9NX40 245 aa16.44■□□□□ 0.22
SHANK1-202ENST00000359082 SERTM1A2A2V5 107 aa16.44■□□□□ 0.22
SHANK1-202ENST00000359082 BMPR1BO00238 502 aa16.44■□□□□ 0.22
SHANK1-202ENST00000359082 UBALD2Q8IYN6 164 aa16.44■□□□□ 0.22
SHANK1-202ENST00000359082 DOK1Q99704 481 aa16.44■□□□□ 0.22
SHANK1-202ENST00000359082 SSC5DA1L4H1 1573 aa16.44■□□□□ 0.22
SHANK1-202ENST00000359082 RANP62826 216 aaKnown RBP16.44■□□□□ 0.22
SHANK1-202ENST00000359082 Q3ZCU0 254 aa16.44■□□□□ 0.22
SHANK1-202ENST00000359082 TOMM20LQ6UXN7 152 aa16.44■□□□□ 0.22
SHANK1-202ENST00000359082 MAFAQ8NHW3 353 aaPredicted RBP16.44■□□□□ 0.22
SHANK1-202ENST00000359082 ZMAT5Q9UDW3 170 aaKnown RBP16.44■□□□□ 0.22
SHANK1-202ENST00000359082 HYAL3O43820 417 aaPredicted RBP16.44■□□□□ 0.22
SHANK1-202ENST00000359082 KCNJ3P48549 501 aa16.44■□□□□ 0.22
SHANK1-202ENST00000359082 SMIM4Q8WVI0 70 aa16.44■□□□□ 0.22
SHANK1-202ENST00000359082 CCL17Q92583 94 aa16.44■□□□□ 0.22
SHANK1-202ENST00000359082 FAAP24Q9BTP7 215 aa16.44■□□□□ 0.22
SHANK1-202ENST00000359082 DUSP21Q9H596 190 aa16.44■□□□□ 0.22
SHANK1-202ENST00000359082 TRBV5-4A0A0C4DH59 114 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 METAP1P53582 386 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 SLC37A1P57057 533 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 NHLH1Q02575 133 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 NHLH2Q02577 135 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 FUT7Q11130 342 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 GUSBP11Q6P575 273 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 GNRHR2Q96P88 292 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 TRAPPC4Q9Y296 219 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 TEX50A0A1B0GTY4 177 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 SLC17A2O00624 439 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 CLRN3Q8NCR9 226 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 FER1L6Q2WGJ9 1857 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 TOX3O15405 576 aaPredicted RBP16.43■□□□□ 0.22
SHANK1-202ENST00000359082 TSPAN12O95859 305 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 NOVA1P51513 510 aaKnown RBP16.43■□□□□ 0.22
SHANK1-202ENST00000359082 BTNL3Q6UXE8 466 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 ERRFI1Q9UJM3 462 aaPredicted RBP16.43■□□□□ 0.22
SHANK1-202ENST00000359082 ITGB4P16144 1822 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 GZMKP49863 264 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 B4GALNT1Q00973 533 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 SLC38A11Q08AI6 406 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 GAMTQ14353 236 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 WDR38Q5JTN6 314 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 TEX261Q6UWH6 196 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 C19orf35Q6ZS72 473 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 MOB1BQ7L9L4 216 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 SLC36A1Q7Z2H8 476 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 TMEM30AQ9NV96 361 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 UQCC1Q9NVA1 299 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 U3KQ87 197 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 CRXO43186 299 aaPredicted RBP16.43■□□□□ 0.22
SHANK1-202ENST00000359082 GNG3P63215 75 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 INSL4Q14641 139 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 ZNF774Q6NX45 483 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 OR2D2Q9H210 308 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 IFT22Q9H7X7 185 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 MTCH2Q9Y6C9 303 aa16.43■□□□□ 0.22
SHANK1-202ENST00000359082 MASP2O00187 686 aa16.42■□□□□ 0.22
SHANK1-202ENST00000359082 IGHV3-13P01766 116 aa16.42■□□□□ 0.22
SHANK1-202ENST00000359082 IGHV3-7P01780 117 aa16.42■□□□□ 0.22
SHANK1-202ENST00000359082 GUK1Q16774 197 aa16.42■□□□□ 0.22
SHANK1-202ENST00000359082 RPEL1Q2QD12 228 aa16.42■□□□□ 0.22
SHANK1-202ENST00000359082 PPIL1Q9Y3C6 166 aa16.42■□□□□ 0.22
SHANK1-202ENST00000359082 C3orf85A0A1B0GTC6 90 aa16.42■□□□□ 0.22
SHANK1-202ENST00000359082 GNG4P50150 75 aa16.42■□□□□ 0.22
SHANK1-202ENST00000359082 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.42■□□□□ 0.22
SHANK1-202ENST00000359082 PP6455Q8WZ26 134 aa16.42■□□□□ 0.22
SHANK1-202ENST00000359082 RAE1P78406 368 aaKnown RBP16.42■□□□□ 0.22
SHANK1-202ENST00000359082 TOGARAM1Q9Y4F4 1720 aa16.42■□□□□ 0.22
SHANK1-202ENST00000359082 SPTY2D1-AS1A0A0U1RR47 76 aa16.42■□□□□ 0.22
SHANK1-202ENST00000359082 KIAA1324LA8MWY0 1029 aaPredicted RBP16.42■□□□□ 0.22
SHANK1-202ENST00000359082 NEURL1O76050 574 aa16.42■□□□□ 0.22
SHANK1-202ENST00000359082 CSF2RBP32927 897 aa16.42■□□□□ 0.22
SHANK1-202ENST00000359082 VWA1Q6PCB0 445 aa16.42■□□□□ 0.22
SHANK1-202ENST00000359082 ANKRD37Q7Z713 158 aa16.42■□□□□ 0.22
SHANK1-202ENST00000359082 Q8IYB0 196 aa16.42■□□□□ 0.22
SHANK1-202ENST00000359082 RFESDQ8TAC1 157 aa16.42■□□□□ 0.22
SHANK1-202ENST00000359082 NAT8BQ9UHF3 227 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms