RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 FOXB2Q5VYV0 432 aa13.34□□□□□ -0.27
LMX1B-201ENST00000355497 WDR73Q6P4I2 378 aa13.34□□□□□ -0.27
LMX1B-201ENST00000355497 MRGPREQ86SM8 312 aa13.34□□□□□ -0.27
LMX1B-201ENST00000355497 CCDC190Q86UF4 302 aa13.34□□□□□ -0.27
LMX1B-201ENST00000355497 MAP1LC3BQ9GZQ8 125 aa13.34□□□□□ -0.27
LMX1B-201ENST00000355497 NXF2Q9GZY0 626 aaKnown RBP13.34□□□□□ -0.27
LMX1B-201ENST00000355497 SP1P08047 785 aa13.34□□□□□ -0.27
LMX1B-201ENST00000355497 PPP2CBP62714 309 aa13.34□□□□□ -0.27
LMX1B-201ENST00000355497 TGIF2LXQ8IUE1 241 aa13.34□□□□□ -0.27
LMX1B-201ENST00000355497 EIF4E3Q8N5X7 224 aaKnown RBP13.34□□□□□ -0.27
LMX1B-201ENST00000355497 SPACA9Q96E40 222 aaPredicted RBP13.34□□□□□ -0.27
LMX1B-201ENST00000355497 FKBP11Q9NYL4 201 aa13.34□□□□□ -0.27
LMX1B-201ENST00000355497 SOCS7O14512 581 aa13.34□□□□□ -0.27
LMX1B-201ENST00000355497 ETHE1O95571 254 aa13.34□□□□□ -0.27
LMX1B-201ENST00000355497 NGFP01138 241 aa13.34□□□□□ -0.27
LMX1B-201ENST00000355497 PMS2P11Q13670 270 aa13.34□□□□□ -0.27
LMX1B-201ENST00000355497 BET1LQ9NYM9 111 aa13.34□□□□□ -0.27
LMX1B-201ENST00000355497 C3orf85A0A1B0GTC6 90 aa13.33□□□□□ -0.27
LMX1B-201ENST00000355497 SLC37A1P57057 533 aa13.33□□□□□ -0.27
LMX1B-201ENST00000355497 MICBQ29980 383 aa13.33□□□□□ -0.27
LMX1B-201ENST00000355497 FAM27D1Q5T7N8 215 aa13.33□□□□□ -0.27
LMX1B-201ENST00000355497 OR4A4PQ8NGN8 299 aa13.33□□□□□ -0.27
LMX1B-201ENST00000355497 RPEQ96AT9 228 aa13.33□□□□□ -0.27
LMX1B-201ENST00000355497 TIAM2Q8IVF5 1701 aa13.33□□□□□ -0.27
LMX1B-201ENST00000355497 MS4A18H0YCH9 400 aa13.33□□□□□ -0.28
LMX1B-201ENST00000355497 H3BVH4 76 aa13.33□□□□□ -0.28
LMX1B-201ENST00000355497 RPL24P83731 157 aaKnown RBP13.33□□□□□ -0.28
LMX1B-201ENST00000355497 MS4A18Q3C1V0 323 aa13.33□□□□□ -0.28
LMX1B-201ENST00000355497 C12orf73Q69YU5 71 aa13.33□□□□□ -0.28
LMX1B-201ENST00000355497 TIPARPQ7Z3E1 657 aaKnown RBP13.33□□□□□ -0.28
LMX1B-201ENST00000355497 VASH2Q86V25 355 aa13.33□□□□□ -0.28
LMX1B-201ENST00000355497 KTI12Q96EK9 354 aaPredicted RBP13.33□□□□□ -0.28
LMX1B-201ENST00000355497 PHF7Q9BWX1 381 aaPredicted RBP13.33□□□□□ -0.28
LMX1B-201ENST00000355497 RASL12Q9NYN1 266 aa13.33□□□□□ -0.28
LMX1B-201ENST00000355497 NPTNQ9Y639 398 aa13.33□□□□□ -0.28
LMX1B-201ENST00000355497 LINC01387J3KSC0 135 aa13.33□□□□□ -0.28
LMX1B-201ENST00000355497 GFRALQ6UXV0 394 aa13.33□□□□□ -0.28
LMX1B-201ENST00000355497 SNRPEP62304 92 aaKnown RBP13.33□□□□□ -0.28
LMX1B-201ENST00000355497 FNDC7Q5VTL7 733 aa13.33□□□□□ -0.28
LMX1B-201ENST00000355497 MAP6Q96JE9 813 aa13.33□□□□□ -0.28
LMX1B-201ENST00000355497 SLC35B3Q9H1N7 401 aa13.33□□□□□ -0.28
LMX1B-201ENST00000355497 OR2T8A6NH00 312 aa13.33□□□□□ -0.28
LMX1B-201ENST00000355497 DEFB108AA8MXU0 73 aa13.33□□□□□ -0.28
LMX1B-201ENST00000355497 IGHA1P01876 353 aa13.33□□□□□ -0.28
LMX1B-201ENST00000355497 IGHA2P01877 340 aa13.33□□□□□ -0.28
LMX1B-201ENST00000355497 ORM1P02763 201 aa13.33□□□□□ -0.28
LMX1B-201ENST00000355497 RHOBP62745 196 aa13.33□□□□□ -0.28
LMX1B-201ENST00000355497 TUSC5Q8IXB3 177 aa13.33□□□□□ -0.28
LMX1B-201ENST00000355497 OR5C1Q8NGR4 320 aa13.33□□□□□ -0.28
LMX1B-201ENST00000355497 PRO1933Q9H354 126 aa13.33□□□□□ -0.28
LMX1B-201ENST00000355497 CYSLTR2Q9NS75 346 aa13.33□□□□□ -0.28
LMX1B-201ENST00000355497 CLEC1BQ9P126 229 aa13.33□□□□□ -0.28
LMX1B-201ENST00000355497 TRAPPC4Q9Y296 219 aa13.33□□□□□ -0.28
LMX1B-201ENST00000355497 HIST1H1DP16402 221 aaKnown RBP13.32□□□□□ -0.28
LMX1B-201ENST00000355497 CD96P40200 585 aa13.32□□□□□ -0.28
LMX1B-201ENST00000355497 GFERP55789 205 aa13.32□□□□□ -0.28
LMX1B-201ENST00000355497 ARHGAP5-AS1Q96IT6 56 aa13.32□□□□□ -0.28
LMX1B-201ENST00000355497 SLC6A1P30531 599 aa13.32□□□□□ -0.28
LMX1B-201ENST00000355497 OR10C1Q96KK4 312 aa13.32□□□□□ -0.28
LMX1B-201ENST00000355497 CYB5R1Q9UHQ9 305 aa13.32□□□□□ -0.28
LMX1B-201ENST00000355497 ALG1L2C9J202 215 aa13.32□□□□□ -0.28
LMX1B-201ENST00000355497 DNASE2O00115 360 aaPredicted RBP13.32□□□□□ -0.28
LMX1B-201ENST00000355497 FAM87AP0C7U9 286 aa13.32□□□□□ -0.28
LMX1B-201ENST00000355497 ZNF260Q3ZCT1 412 aa13.32□□□□□ -0.28
LMX1B-201ENST00000355497 LINC00615Q96LM1 132 aaPredicted RBP13.32□□□□□ -0.28
LMX1B-201ENST00000355497 FAM24AA6NFZ4 105 aa13.32□□□□□ -0.28
LMX1B-201ENST00000355497 SLC25A1P53007 311 aa13.32□□□□□ -0.28
LMX1B-201ENST00000355497 TIAL1Q01085 375 aaKnown RBP eCLIP13.32□□□□□ -0.28
LMX1B-201ENST00000355497 LYG1Q8N1E2 194 aa13.32□□□□□ -0.28
LMX1B-201ENST00000355497 PLPPR2Q96GM1 343 aa13.32□□□□□ -0.28
LMX1B-201ENST00000355497 RHNO1Q9BSD3 238 aa13.32□□□□□ -0.28
LMX1B-201ENST00000355497 SEBOXQ9HB31 216 aaPredicted RBP13.32□□□□□ -0.28
LMX1B-201ENST00000355497 PSG11Q9UQ72 335 aa13.32□□□□□ -0.28
LMX1B-201ENST00000355497 A0A1W2PN81 502 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 A0A1W2PPC4 97 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 CHRNA7P36544 502 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 CNRIP1Q96F85 164 aaPredicted RBP13.31□□□□□ -0.28
LMX1B-201ENST00000355497 FAM210BQ96KR6 192 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 DOK1Q99704 481 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 C20orf141Q9NUB4 165 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 ERRFI1Q9UJM3 462 aaPredicted RBP13.31□□□□□ -0.28
LMX1B-201ENST00000355497 HLXQ14774 488 aaPredicted RBP13.31□□□□□ -0.28
LMX1B-201ENST00000355497 TEX101Q9BY14 249 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 SEC11CQ9BY50 192 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 CRYABP02511 175 aaKnown RBP13.31□□□□□ -0.28
LMX1B-201ENST00000355497 WNT1P04628 370 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 OR1C1Q15619 314 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 SLC26A10Q8NG04 563 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 FAAP24Q9BTP7 215 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 ESRP2Q9H6T0 727 aaKnown RBP13.31□□□□□ -0.28
LMX1B-201ENST00000355497 IL21Q9HBE4 155 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 AMMECR1Q9Y4X0 333 aaPredicted RBP13.31□□□□□ -0.28
LMX1B-201ENST00000355497 CST2P09228 141 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 OR11G2Q8NGC1 345 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 OR6S1Q8NH40 331 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 MRGPRX1Q96LB2 322 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 TNFRSF12AQ9NP84 129 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 MMP24Q9Y5R2 645 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 C9orf170A2RU37 121 aa13.31□□□□□ -0.28
LMX1B-201ENST00000355497 RGS13O14921 159 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms