RNA–Protein interactions for RNA: ENST00000355233.9

PTPRD-201, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-201ENST00000355233 MPC1Q9Y5U8 109 aa4.43□□□□□ -1.7
PTPRD-201ENST00000355233 A0A1B0GX78 115 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 IQCF5A8MTL0 148 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 A8MUA0 341 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 ZBTB42B2RXF5 422 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 TMEM250H0YL14 139 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 MPPED1O15442 326 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 UTS2O95399 124 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 HBZP02008 142 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 ISG15P05161 165 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 CD82P27701 267 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 HSF1Q00613 529 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 SRSF7Q16629 238 aaKnown RBP eCLIP4.42□□□□□ -1.7
PTPRD-201ENST00000355233 Q6ZSR9 355 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 PTOV1Q86YD1 416 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 ZADH2Q8N4Q0 377 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 OTOSQ8NHW6 89 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 PMEPA1Q969W9 287 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 EID2BQ96D98 161 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 OR2V2Q96R30 315 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 GPR87Q9BY21 358 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 OSGIN2Q9Y236 505 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 VSIG4Q9Y279 399 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 ZFP30Q9Y2G7 519 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 TANC1Q9C0D5 1861 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 RBFOX3A6NFN3 312 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 WDR1O75083 606 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 C8orf89P0DMQ9 161 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 TIMP2P16035 220 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 VDAC1P21796 283 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 PCSK6P29122 969 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 DEFB134Q4QY38 66 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 ZNF362Q5T0B9 420 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-201ENST00000355233 TMEM71Q6P5X7 295 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 IL20RBQ6UXL0 311 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 CHST14Q8NCH0 376 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 CADM4Q8NFZ8 388 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 DIO2Q92813 273 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 SELENOIQ9C0D9 397 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 GLIPR2Q9H4G4 154 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 SYNPO2LQ9H987 977 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 BEX1Q9HBH7 125 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 WSB1Q9Y6I7 421 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 A0A087WUJ7 227 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 A0A1B0GWA3 101 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 DHRS3O75911 302 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 ATF1P18846 271 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 FUT3P21217 361 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 ZBTB25P24278 435 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 HOXD9P28356 352 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-201ENST00000355233 FABP6P51161 128 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 ARG2P78540 354 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 VAMP3Q15836 100 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 ETFDHQ16134 617 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 SPRED3Q2MJR0 410 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 FDX2Q6P4F2 183 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 FJX1Q86VR8 437 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 LURAP1LQ8IV03 231 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 SPNS2Q8IVW8 549 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 CMTM4Q8IZR5 234 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 TSACCQ96A04 125 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-201ENST00000355233 PRR11Q96HE9 360 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-201ENST00000355233 FOXN4Q96NZ1 517 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 AQP10Q96PS8 301 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 OR8B4Q96RC9 309 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 ADAT1Q9BUB4 502 aaKnown RBP4.42□□□□□ -1.7
PTPRD-201ENST00000355233 R3HDMLQ9H3Y0 253 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 HCFC1R1Q9NWW0 138 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 CES1P1Q9UKY3 287 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 HSF4Q9ULV5 492 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 A0A087X0M5 115 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 A0A1B0GX30 115 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 C7orf71A4D174 169 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 TMEM235A6NFC5 223 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 HMGN4O00479 90 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 HCRTR1O43613 425 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 SLC16A7O60669 478 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 HSBP1O75506 76 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 MPC2O95563 127 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 SMIM17P0DL12 118 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 FCARP24071 287 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 CTSSP25774 331 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 RPS18P62269 152 aaKnown RBP4.42□□□□□ -1.7
PTPRD-201ENST00000355233 DEFB133Q30KQ1 61 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 FBXO48Q5FWF7 155 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 NCMAPQ5T1S8 102 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 OR5AS1Q8N127 324 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 C9orf62Q8N4C0 152 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 ADIPOR1Q96A54 375 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 TIMD4Q96H15 378 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 GAL3ST2Q9H3Q3 398 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 TNFSF18Q9UNG2 199 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 A0A0U1RQV5 110 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 FAM90A9PA6NNJ1 464 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 A8MV72 311 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-201ENST00000355233 MRPL33O75394 65 aaKnown RBP4.42□□□□□ -1.7
PTPRD-201ENST00000355233 CD8AP01732 235 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 OTX2P32243 289 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 AKR1C3P42330 323 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 GDF5P43026 501 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms