RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 TDRG1Q3Y452 100 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 ZNF506Q5JVG8 444 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 NUFIP2Q7Z417 695 aaKnown RBP11.69□□□□□ -0.54
IFT88-202ENST00000351808 GBGT1Q8N5D6 347 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 NECAP1Q8NC96 275 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 TMEM242Q9NWH2 141 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 C19orf53Q9UNZ5 99 aaPredicted RBP11.69□□□□□ -0.54
IFT88-202ENST00000351808 B3GALT5Q9Y2C3 310 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 TRDCB7Z8K6 153 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 H7C4K7 107 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 CHRNB4P30926 498 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 CCKARP32238 428 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 SLC11A1P49279 550 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 EMP2P54851 167 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 PLPP4Q5VZY2 271 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 LHFPL1Q86WI0 220 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 LYPD6Q86Y78 171 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 TMEM123Q8N131 208 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 LMLNQ96KR4 655 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 ST6GALNAC5Q9BVH7 336 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 GRHPRQ9UBQ7 328 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 LSM7Q9UK45 103 aaKnown RBP11.69□□□□□ -0.54
IFT88-202ENST00000351808 OSGIN2Q9Y236 505 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 SLC5A6Q9Y289 635 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 MRPS2Q9Y399 296 aaKnown RBP11.69□□□□□ -0.54
IFT88-202ENST00000351808 XIRP2A4UGR9 3374 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 KIAA1549LQ6ZVL6 1849 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 SOCS1O15524 211 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 AMY2BP19961 511 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 ATP6V0CP27449 155 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 OR10J1P30954 320 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 GRK6P43250 576 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 PDLIM4P50479 330 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 CDK3Q00526 305 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 MRPL52Q86TS9 123 aaKnown RBP11.69□□□□□ -0.54
IFT88-202ENST00000351808 AMZ2Q86W34 360 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 GPR119Q8TDV5 335 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 SDSLQ96GA7 329 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 LINC00615Q96LM1 132 aaPredicted RBP11.69□□□□□ -0.54
IFT88-202ENST00000351808 GPX7Q96SL4 187 aaPredicted RBP11.69□□□□□ -0.54
IFT88-202ENST00000351808 ETV2O00321 342 aaPredicted RBP11.68□□□□□ -0.54
IFT88-202ENST00000351808 CD33P20138 364 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 S100A7P31151 101 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 IDH3GP51553 393 aaPredicted RBP11.68□□□□□ -0.54
IFT88-202ENST00000351808 QRFPP83859 136 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 ZFP36L1Q07352 338 aaKnown RBP11.68□□□□□ -0.54
IFT88-202ENST00000351808 PLAC9Q5JTB6 97 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 COL5A1-AS1Q5SY13 56 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 METRNLQ641Q3 311 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 CDRT4Q8N9R6 151 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 CYB5D2Q8WUJ1 264 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 REEP6Q96HR9 211 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 TP53RKQ96S44 253 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 MIEN1Q9BRT3 115 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 PARD6GQ9BYG4 376 aaPredicted RBP11.68□□□□□ -0.54
IFT88-202ENST00000351808 MSL2Q9HCI7 577 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 EHFQ9NZC4 300 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 HHLA2Q9UM44 414 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 A0A0A6YYD4 124 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 LOC107986453A0A1B0GWG9 222 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 HSPB2A8KAH6 182 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 RAD51DO75771 328 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 EOMESO95936 686 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 ERVS71-1P61550 626 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 HSPB2Q16082 182 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 TPGS2Q68CL5 300 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 VHLLQ6RSH7 139 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 SLC24A5Q71RS6 500 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 CATSPERDQ86XM0 798 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 OR1L6Q8NGR2 347 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 CLDND2Q8NHS1 167 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 EMG1Q92979 244 aaKnown RBP11.68□□□□□ -0.54
IFT88-202ENST00000351808 ACY3Q96HD9 319 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 IGSF21Q96ID5 467 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 B3GAT1Q9P2W7 334 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 C14orf166Q9Y224 244 aaKnown RBP11.68□□□□□ -0.54
IFT88-202ENST00000351808 EMC9Q9Y3B6 208 aa11.68□□□□□ -0.54
IFT88-202ENST00000351808 GON4LQ3T8J9 2241 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 NKX6-3A6NJ46 265 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 AQP7O14520 342 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 UMODP07911 640 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 METAP1P53582 386 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 ZNF117Q03924 483 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 ZP2Q05996 745 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 GPR157Q5UAW9 335 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 FAM90A2PQ658T7 463 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 MAML2Q8IZL2 1156 aaPredicted RBP11.67□□□□□ -0.54
IFT88-202ENST00000351808 LRRC75AQ8NAA5 344 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 ANGPTL4Q9BY76 406 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 NCOR1P1Q9H4R4 102 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 TMEM74BQ9NUR3 256 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 FUT9Q9Y231 359 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 CACNA1IQ9P0X4 2223 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 YLPM1P49750 1951 aaKnown RBP11.67□□□□□ -0.54
IFT88-202ENST00000351808 BRCA2P51587 3418 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 NSG1A0A0A6YYJ2 146 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 TRBV11-1A0A0K0K1C0 115 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 A8MVM7 634 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 PPP5D1E7EU14 171 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 RENP00797 406 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms