RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 ASCL1P50553 236 aa5.59□□□□□ -1.52
CSMD1-201ENST00000335551 FZD2Q14332 565 aa5.59□□□□□ -1.52
CSMD1-201ENST00000335551 IGFBP7Q16270 282 aa5.59□□□□□ -1.52
CSMD1-201ENST00000335551 ASTLQ6HA08 431 aaPredicted RBP5.59□□□□□ -1.52
CSMD1-201ENST00000335551 PARM1Q6UWI2 310 aa5.59□□□□□ -1.52
CSMD1-201ENST00000335551 OR1L6Q8NGR2 347 aa5.59□□□□□ -1.52
CSMD1-201ENST00000335551 C11orf40Q8WZ69 217 aa5.59□□□□□ -1.52
CSMD1-201ENST00000335551 MOB3AQ96BX8 217 aa5.59□□□□□ -1.52
CSMD1-201ENST00000335551 LCORQ96JN0 433 aaPredicted RBP5.59□□□□□ -1.52
CSMD1-201ENST00000335551 OCIAD1Q9NX40 245 aa5.59□□□□□ -1.52
CSMD1-201ENST00000335551 ANXA10Q9UJ72 324 aa5.59□□□□□ -1.52
CSMD1-201ENST00000335551 LTBP3Q9NS15 1303 aa5.59□□□□□ -1.52
CSMD1-201ENST00000335551 EIF4E2O60573 245 aaKnown RBP5.58□□□□□ -1.52
CSMD1-201ENST00000335551 INHBBP09529 407 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 NCMAPQ5T1S8 102 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 VHLLQ6RSH7 139 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 PDPNQ86YL7 162 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 PIANPQ8IYJ0 282 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 NAT6Q93015 286 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 IGSF21Q96ID5 467 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 TMEM204Q9BSN7 226 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 ACER3Q9NUN7 267 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 OOEPA6NGQ2 149 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 ACTL6AO96019 429 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 MELTFP08582 738 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 PRSS56P0CW18 603 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 PVRP15151 417 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 RPS4Y1P22090 263 aaKnown RBP5.58□□□□□ -1.52
CSMD1-201ENST00000335551 MDH2P40926 338 aaKnown RBP5.58□□□□□ -1.52
CSMD1-201ENST00000335551 FAM71E1Q6IPT2 247 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 SEZ6L2Q6UXD5 910 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 GPRIN1Q7Z2K8 1008 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 VASH2Q86V25 355 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 TUSC5Q8IXB3 177 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 DEFB119Q8N690 84 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 OR52E1Q8NGJ3 308 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 TMEM56Q96MV1 263 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 ZPBPQ9BS86 351 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 CXorf65A6NEN9 183 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 DRGXA6NNA5 263 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 ABLIM3O94929 683 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 GOSR1O95249 250 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 SCAND1P57086 179 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 OR1D5P58170 312 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 EVX2Q03828 476 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 GSG1Q2KHT4 349 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 SPATA45Q537H7 98 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 ZDHHC23Q8IYP9 409 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 OR1L4Q8NGR5 311 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 SLAMF6Q96DU3 332 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 UBE2ZQ9H832 354 aaPredicted RBP5.58□□□□□ -1.52
CSMD1-201ENST00000335551 TIMM10BQ9Y5J6 103 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 PPM1DO15297 605 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 CSNK1DP48730 415 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 PRDX1Q06830 199 aaKnown RBP5.58□□□□□ -1.52
CSMD1-201ENST00000335551 AESQ08117 197 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 TMEM267Q0VDI3 215 aaPredicted RBP5.58□□□□□ -1.52
CSMD1-201ENST00000335551 ADIPOQQ15848 244 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 FAM209AQ5JX71 171 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 MANEAQ5SRI9 462 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 Q6ZSR6 202 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 APCDD1Q8J025 514 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 NEURL2Q9BR09 285 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 PRSS50Q9UI38 385 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 PRSS38A1L453 326 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 OR5B21A6NL26 309 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 CST7O76096 145 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 GJB5O95377 273 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 CD70P32970 193 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 RPL30P62888 115 aaKnown RBP5.58□□□□□ -1.52
CSMD1-201ENST00000335551 IL10RAQ13651 578 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 JOSD1Q15040 202 aaPredicted RBP5.58□□□□□ -1.52
CSMD1-201ENST00000335551 PMCHL1Q16048 86 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 DGAT2L7PQ6IED9 249 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 C15orf39Q6ZRI6 1047 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 NUP37Q8NFH4 326 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 LRRC15Q8TF66 581 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 GLIPR2Q9H4G4 154 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 SRD5A3Q9H8P0 318 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.58□□□□□ -1.52
CSMD1-201ENST00000335551 PTRH2Q9Y3E5 179 aaKnown RBP5.58□□□□□ -1.52
CSMD1-201ENST00000335551 RIF1Q5UIP0 2472 aaKnown RBP5.58□□□□□ -1.52
CSMD1-201ENST00000335551 P2RY2P41231 377 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 ZNF252P-AS1Q0IIN9 211 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 ZNF141Q15928 474 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 GLCCI1Q86VQ1 547 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 CALHM2Q9HA72 323 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 CDC42EP3Q9UKI2 254 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 SNED1Q8TER0 1413 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 DSCR3O14972 297 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 USP53Q70EK8 1073 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 WDTC1Q8N5D0 677 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 TMEM99Q8N816 258 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 ACY3Q96HD9 319 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 MARVELD1Q9BSK0 173 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 ARAP2Q8WZ64 1704 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 CDC14CA4D256 554 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 ZNF785A8K8V0 405 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 CD40P25942 277 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 RPS16P62249 146 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms