RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 MTFP1Q9UDX5 166 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 RBP4P02753 201 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 FABP4P15090 132 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 KISS1Q15726 138 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 TRMT61AQ96FX7 289 aaKnown RBP18.82■□□□□ 0.6
RNF40-201ENST00000324685 ZNF385DQ9H6B1 395 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 RASL12Q9NYN1 266 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 EPPINO95925 133 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 NGFP01138 241 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 ZNF66Q6ZN08 573 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 ZNF596Q8TC21 504 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 TMEM9BQ9NQ34 198 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 BMP5P22003 454 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 CRYBB2P43320 205 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 OR1C1Q15619 314 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 TMEM241Q24JQ0 296 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 Q56UQ5 140 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 TOMM20LQ6UXN7 152 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 OR4C5Q8NGB2 326 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 ARHGAP5-AS1Q96IT6 56 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 FKBP11Q9NYL4 201 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 CLDN34H7C241 214 aa18.81■□□□□ 0.6
RNF40-201ENST00000324685 CXCL10P02778 98 aa18.81■□□□□ 0.6
RNF40-201ENST00000324685 SCGB1C2P0DMR2 95 aa18.81■□□□□ 0.6
RNF40-201ENST00000324685 NKG7Q16617 165 aa18.81■□□□□ 0.6
RNF40-201ENST00000324685 DHRS7BQ6IAN0 325 aaPredicted RBP18.81■□□□□ 0.6
RNF40-201ENST00000324685 DEGS2Q6QHC5 323 aa18.81■□□□□ 0.6
RNF40-201ENST00000324685 ZDHHC16Q969W1 377 aa18.81■□□□□ 0.6
RNF40-201ENST00000324685 PCED1AQ9H1Q7 454 aa18.81■□□□□ 0.6
RNF40-201ENST00000324685 WSB1Q9Y6I7 421 aa18.81■□□□□ 0.6
RNF40-201ENST00000324685 MYO18AQ92614 2054 aaKnown RBP18.81■□□□□ 0.6
RNF40-201ENST00000324685 C3orf85A0A1B0GTC6 90 aa18.81■□□□□ 0.6
RNF40-201ENST00000324685 SERTM1A2A2V5 107 aa18.81■□□□□ 0.6
RNF40-201ENST00000324685 METTL12A8MUP2 240 aa18.81■□□□□ 0.6
RNF40-201ENST00000324685 KRASP01116 189 aa18.81■□□□□ 0.6
RNF40-201ENST00000324685 Q7L0L9 218 aa18.81■□□□□ 0.6
RNF40-201ENST00000324685 HLXQ14774 488 aaPredicted RBP18.81■□□□□ 0.6
RNF40-201ENST00000324685 MRGPREQ86SM8 312 aa18.81■□□□□ 0.6
RNF40-201ENST00000324685 PHIPQ8WWQ0 1821 aa18.81■□□□□ 0.6
RNF40-201ENST00000324685 TRGV5A0A0B4J1U4 118 aa18.81■□□□□ 0.6
RNF40-201ENST00000324685 HIST1H3AP68431 136 aa18.81■□□□□ 0.6
RNF40-201ENST00000324685 IL13RA2Q14627 380 aa18.81■□□□□ 0.6
RNF40-201ENST00000324685 ST3GAL2Q16842 350 aa18.81■□□□□ 0.6
RNF40-201ENST00000324685 OR2Z1Q8NG97 314 aa18.81■□□□□ 0.6
RNF40-201ENST00000324685 IL21Q9HBE4 155 aa18.81■□□□□ 0.6
RNF40-201ENST00000324685 IFT22Q9H7X7 185 aa18.8■□□□□ 0.6
RNF40-201ENST00000324685 C9orf170A2RU37 121 aa18.8■□□□□ 0.6
RNF40-201ENST00000324685 LPAR6P43657 344 aa18.8■□□□□ 0.6
RNF40-201ENST00000324685 RNASEKQ6P5S7 137 aaKnown RBP18.8■□□□□ 0.6
RNF40-201ENST00000324685 PHYHIPLQ96FC7 376 aa18.8■□□□□ 0.6
RNF40-201ENST00000324685 CD96P40200 585 aa18.8■□□□□ 0.6
RNF40-201ENST00000324685 PTGFRP43088 359 aa18.8■□□□□ 0.6
RNF40-201ENST00000324685 C4orf45Q96LM5 186 aa18.8■□□□□ 0.6
RNF40-201ENST00000324685 ASPDHA6ND91 283 aa18.8■□□□□ 0.6
RNF40-201ENST00000324685 SLC25A5P05141 298 aaKnown RBP18.8■□□□□ 0.6
RNF40-201ENST00000324685 PPP1CAP62136 330 aa18.8■□□□□ 0.6
RNF40-201ENST00000324685 MICBQ29980 383 aa18.8■□□□□ 0.6
RNF40-201ENST00000324685 RPEL1Q2QD12 228 aa18.8■□□□□ 0.6
RNF40-201ENST00000324685 TIPARPQ7Z3E1 657 aaKnown RBP18.8■□□□□ 0.6
RNF40-201ENST00000324685 DNAJB12Q9NXW2 375 aaKnown RBP18.8■□□□□ 0.6
RNF40-201ENST00000324685 B3GALNT1O75752 331 aa18.8■□□□□ 0.6
RNF40-201ENST00000324685 CCKARP32238 428 aa18.8■□□□□ 0.6
RNF40-201ENST00000324685 GNG4P50150 75 aa18.8■□□□□ 0.6
RNF40-201ENST00000324685 SP6Q3SY56 376 aa18.8■□□□□ 0.6
RNF40-201ENST00000324685 NAA60Q9H7X0 242 aa18.8■□□□□ 0.6
RNF40-201ENST00000324685 CTAG2O75638 210 aa18.79■□□□□ 0.6
RNF40-201ENST00000324685 IGFBP6P24592 240 aaPredicted RBP18.79■□□□□ 0.6
RNF40-201ENST00000324685 TRA2AQ13595 282 aaKnown RBP eCLIP18.79■□□□□ 0.6
RNF40-201ENST00000324685 OR11G2Q8NGC1 345 aa18.79■□□□□ 0.6
RNF40-201ENST00000324685 NAT8BQ9UHF3 227 aa18.79■□□□□ 0.6
RNF40-201ENST00000324685 MTCH2Q9Y6C9 303 aa18.79■□□□□ 0.6
RNF40-201ENST00000324685 TJP1Q07157 1748 aa18.79■□□□□ 0.6
RNF40-201ENST00000324685 OPRK1P41145 380 aa18.79■□□□□ 0.6
RNF40-201ENST00000324685 SLC35B3Q9H1N7 401 aa18.79■□□□□ 0.6
RNF40-201ENST00000324685 PPP1R1AQ13522 171 aa18.79■□□□□ 0.6
RNF40-201ENST00000324685 ETFDHQ16134 617 aa18.79■□□□□ 0.6
RNF40-201ENST00000324685 XAF1Q6GPH4 301 aa18.79■□□□□ 0.6
RNF40-201ENST00000324685 ONECUT1Q9UBC0 465 aa18.79■□□□□ 0.6
RNF40-201ENST00000324685 MAP1LC3B2A6NCE7 125 aa18.79■□□□□ 0.6
RNF40-201ENST00000324685 DHRS2Q13268 280 aa18.79■□□□□ 0.6
RNF40-201ENST00000324685 MRM1Q6IN84 353 aaKnown RBP18.79■□□□□ 0.6
RNF40-201ENST00000324685 MAP1LC3BQ9GZQ8 125 aa18.79■□□□□ 0.6
RNF40-201ENST00000324685 SIRT5Q9NXA8 310 aa18.79■□□□□ 0.6
RNF40-201ENST00000324685 PLCH1Q4KWH8 1693 aa18.78■□□□□ 0.6
RNF40-201ENST00000324685 CDC14BO60729 498 aa18.78■□□□□ 0.6
RNF40-201ENST00000324685 SLC37A1P57057 533 aa18.78■□□□□ 0.6
RNF40-201ENST00000324685 BTNL3Q6UXE8 466 aa18.78■□□□□ 0.6
RNF40-201ENST00000324685 CD300LDQ6UXZ3 194 aa18.78■□□□□ 0.6
RNF40-201ENST00000324685 MUC20Q8N307 709 aaPredicted RBP18.78■□□□□ 0.6
RNF40-201ENST00000324685 ANKRD34CP0C6C1 535 aa18.78■□□□□ 0.6
RNF40-201ENST00000324685 TCTEX1D1Q8N7M0 179 aa18.78■□□□□ 0.6
RNF40-201ENST00000324685 GOSR1O95249 250 aa18.78■□□□□ 0.6
RNF40-201ENST00000324685 ATP6V1FQ16864 119 aa18.78■□□□□ 0.6
RNF40-201ENST00000324685 WIPI1Q5MNZ9 446 aaPredicted RBP18.78■□□□□ 0.6
RNF40-201ENST00000324685 GFRALQ6UXV0 394 aa18.78■□□□□ 0.6
RNF40-201ENST00000324685 MISP3Q96FF7 219 aa18.78■□□□□ 0.6
RNF40-201ENST00000324685 TSPAN32Q96QS1 320 aa18.78■□□□□ 0.6
RNF40-201ENST00000324685 CLEC1BQ9P126 229 aa18.78■□□□□ 0.6
RNF40-201ENST00000324685 RGS13O14921 159 aa18.78■□□□□ 0.6
RNF40-201ENST00000324685 GYPAP02724 150 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms